RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FASTKD3Q14CZ7 662 aaKnown RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 HIF1AQ16665 826 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 SLC25A52Q3SY17 297 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 RAB41Q5JT25 222 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 ANKRD22Q5VYY1 191 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 WSCD1Q658N2 575 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 C4orf22Q6V702 233 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 B4GALNT4Q76KP1 1039 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 MDM1Q8TC05 714 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 KCTD15Q96SI1 283 aaPredicted RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 NPY6RQ99463 290 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 SELENOSQ9BQE4 189 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 WDR83Q9BRX9 315 aaKnown RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 DHRS4Q9BTZ2 278 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 CFHR5Q9BXR6 569 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 FRMD8Q9BZ67 464 aaPredicted RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 NRDE2Q9H7Z3 1164 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 AGO3Q9H9G7 860 aaKnown RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 UBN1Q9NPG3 1134 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 PPANQ9NQ55 473 aaKnown RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 CRTAC1Q9NQ79 661 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 XPNPEP3Q9NQH7 507 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 GPATCH2LQ9NWQ4 482 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 PAK5Q9P286 719 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 CTNNAL1Q9UBT7 734 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 RSPH14Q9UHP6 348 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 SLC24A2Q9UI40 661 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 FZD10Q9ULW2 581 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 AP4E1Q9UPM8 1137 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 RRP15Q9Y3B9 282 aaKnown RBP10.22□□□□□ -0.77
USP39-214ENST00000474572 PTCH2Q9Y6C5 1203 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 CLUHO75153 1309 aa10.22□□□□□ -0.77
USP39-214ENST00000474572 SF3B1O75533 1304 aaKnown RBP eCLIP10.22□□□□□ -0.773e-9■■■■■ 206.8
USP39-214ENST00000474572 TCRBV7S3A2A0A539 114 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 TMEM88BA6NKF7 163 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 MGEA5O60502 916 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 ATP2C2O75185 946 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 BEST1O76090 585 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 FBXO21O94952 628 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CYP11A1P05108 521 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 LCP1P13796 627 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CYP2F1P24903 491 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 NR2C2P49116 596 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 SLC18A1P54219 525 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 ATXN1P54253 815 aaKnown RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 BCAR1P56945 870 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CORO7P57737 925 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 GPX6P59796 221 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CAP1Q01518 475 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 ADIGQ0VDE8 80 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 PDIA2Q13087 525 aaKnown RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 NR1H3Q13133 447 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CYP4F22Q6NT55 531 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 SCYL2Q6P3W7 929 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 C6orf89Q6UWU4 347 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 PPP1R21Q6ZMI0 780 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 YTHDF3Q7Z739 585 aaKnown RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 TADA2BQ86TJ2 420 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 FAM35AQ86V20 835 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CDKL3Q8IVW4 592 aaPredicted RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 CCDC13Q8IYE1 715 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 DEFB106AQ8N104 65 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CYP4X1Q8N118 509 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 SCML4Q8N228 414 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 FAM71DQ8N9W8 422 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 ATP11CQ8NB49 1132 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 C3orf58Q8NDZ4 430 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 ZMIZ2Q8NF64 920 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 GAD1Q99259 594 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 SYT15Q9BQS2 421 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 OSBPL7Q9BZF2 842 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 FAM107BQ9H098 131 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 C10orf88Q9H8K7 445 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 CSNK1G1Q9HCP0 422 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 INTS9Q9NV88 658 aaKnown RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
USP39-214ENST00000474572 CDH9Q9ULB4 789 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 PADI3Q9ULW8 664 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 NAALADL1Q9UQQ1 740 aa10.21□□□□□ -0.77
USP39-214ENST00000474572 A0A0U1RQF3 1178 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 ARL5CA6NH57 179 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 HHLA1C9JL84 531 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 CABYRO75952 493 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 CTSHP09668 335 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 FAM200BP0CF97 657 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 IGFBP6P24592 240 aaPredicted RBP10.2□□□□□ -0.78
USP39-214ENST00000474572 CCND3P30281 292 aaPredicted RBP10.2□□□□□ -0.78
USP39-214ENST00000474572 SULT1E1P49888 294 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 SCNN1GP51170 649 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 CLCNKBP51801 687 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 AFF1P51825 1210 aaKnown RBP10.2□□□□□ -0.78
USP39-214ENST00000474572 AIF1P55008 147 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 SLC8A3P57103 927 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 DAOAP59103 153 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 GAD2Q05329 585 aa10.2□□□□□ -0.78
USP39-214ENST00000474572 RNASELQ05823 741 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms