RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 HTR3DQ70Z44 454 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 CEP68Q76N32 757 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 PHTF2Q8N3S3 785 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 CCDC33Q8N5R6 958 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 FAM160A2Q8N612 972 aaPredicted RBP20.93■□□□□ 0.94
TMEM54-204ENST00000474144 LMO3Q8TAP4 145 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 NDRG1Q92597 394 aaKnown RBP20.93■□□□□ 0.94
TMEM54-204ENST00000474144 KAT5Q92993 513 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 UBXN6Q9BZV1 441 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 FAM124BQ9H5Z6 455 aaPredicted RBP20.93■□□□□ 0.94
TMEM54-204ENST00000474144 ZDHHC4Q9NPG8 344 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 TSPAN16Q9UKR8 245 aa20.93■□□□□ 0.94
TMEM54-204ENST00000474144 TRIM24O15164 1050 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 KAT7O95251 611 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 APODP05090 189 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 CHRM1P11229 460 aaPredicted RBP20.92■□□□□ 0.94
TMEM54-204ENST00000474144 CD19P15391 556 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 EIF2DP41214 584 aaKnown RBP20.92■□□□□ 0.94
TMEM54-204ENST00000474144 UBE2HP62256 183 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 PDE4CQ08493 712 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 ANO4Q32M45 955 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 SGO2Q562F6 1265 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 RAB41Q5JT25 222 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 KLHDC10Q6PID8 442 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.92■□□□□ 0.94
TMEM54-204ENST00000474144 ETFBKMTQ8IXQ9 262 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 CAMKK1Q8N5S9 505 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 UBA3Q8TBC4 463 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 GAB3Q8WWW8 586 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 ACDQ96AP0 544 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 SRRTQ9BXP5 876 aaKnown RBP20.92■□□□□ 0.94
TMEM54-204ENST00000474144 ARHGEF4Q9NR80 690 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 CHMP5Q9NZZ3 219 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 DNMT3LQ9UJW3 386 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 USP18Q9UMW8 372 aa20.92■□□□□ 0.94
TMEM54-204ENST00000474144 CCDC163A0A0D9SF12 145 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 RNF225M0QZC1 329 aaPredicted RBP20.91■□□□□ 0.94
TMEM54-204ENST00000474144 PMM2O15305 246 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 HOXC11O43248 304 aaPredicted RBP20.91■□□□□ 0.94
TMEM54-204ENST00000474144 RPP40O75818 363 aaKnown RBP20.91■□□□□ 0.94
TMEM54-204ENST00000474144 CALCAP01258 141 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 RETP07949 1114 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 RALAP11233 206 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 TBXAS1P24557 533 aaPredicted RBP20.91■□□□□ 0.94
TMEM54-204ENST00000474144 TIE1P35590 1138 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 TKTL1P51854 596 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 FOXR2Q6PJQ5 311 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 MIB1Q86YT6 1006 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 TRIM59Q8IWR1 403 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 NT5C1BQ96P26 610 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 RASAL2Q9UJF2 1139 aa20.91■□□□□ 0.94
TMEM54-204ENST00000474144 A0A0A0MRY4 1105 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 AXIN1O15169 862 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 TULP3O75386 442 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 APBB3O95704 486 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 CCDC192P0DO97 292 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 VDRP11473 427 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 HNRNPLP14866 589 aaKnown RBP eCLIP20.9■□□□□ 0.94
TMEM54-204ENST00000474144 PLA2G4AP47712 749 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 PSEN1P49768 467 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 YWHAEP62258 255 aaKnown RBP20.9■□□□□ 0.94
TMEM54-204ENST00000474144 GOLGA8FQ08AF8 430 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 GOLGA8DPQ0D2H9 430 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 KCNH2Q12809 1159 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 BTBD8Q5XKL5 378 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 TMEM270Q6UE05 265 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 TPGS1Q6ZTW0 290 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 RRAGAQ7L523 313 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 BHLHA9Q7RTU4 235 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 KBTBD6Q86V97 674 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 ARHGEF19Q8IW93 802 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 PPM1KQ8N3J5 372 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 ALLCQ8N6M5 410 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 CCDC26Q8TAB7 109 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 TFAP2BQ92481 460 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 P2RY11Q96G91 374 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 ULBP1Q9BZM6 244 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 CLIC5Q9NZA1 410 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 KIAA1468Q9P260 1216 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 MMP17Q9ULZ9 603 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 PCDHB4Q9Y5E5 795 aa20.9■□□□□ 0.94
TMEM54-204ENST00000474144 NEDD8-MDP1E9PL57 170 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 O00370 1275 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 XPO1O14980 1071 aaKnown RBP20.89■□□□□ 0.93
TMEM54-204ENST00000474144 DCLK1O15075 740 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 STC2O76061 302 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 KLF8O95600 359 aaPredicted RBP20.89■□□□□ 0.93
TMEM54-204ENST00000474144 HMBSP08397 361 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 GRIA2P42262 883 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 KIR2DL1P43626 348 aaPredicted RBP20.89■□□□□ 0.93
TMEM54-204ENST00000474144 BCAT1P54687 386 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 SLC8A3P57103 927 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 YWHAGP61981 247 aaKnown RBP eCLIP20.89■□□□□ 0.93
TMEM54-204ENST00000474144 MRPS21P82921 87 aaKnown RBP20.89■□□□□ 0.93
TMEM54-204ENST00000474144 EFEMP1Q12805 493 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 RSPO4Q2I0M5 234 aaPredicted RBP20.89■□□□□ 0.93
TMEM54-204ENST00000474144 TMEM92Q6UXU6 159 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 Q6ZNB5 142 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 ZNF276Q8N554 614 aa20.89■□□□□ 0.93
TMEM54-204ENST00000474144 GPR161Q8N6U8 529 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms