RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CTNNA2P26232 953 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 CTNNA1P35221 906 aaKnown RBP10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 RDXP35241 583 aaKnown RBP10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 PCK1P35558 622 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 FLT3P36888 993 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 PBX2P40425 430 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 PPP3CCP48454 512 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 GPR15P49685 360 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 ERVFC1P60507 584 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 SMAD3P84022 425 aaKnown RBP10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 MLLT1Q03111 559 aaPredicted RBP10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 NME3Q13232 169 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 KRT81Q14533 505 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 WHAMMP3Q1A5X7 153 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC25A52Q3SY17 297 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 PABPC1LQ4VXU2 614 aaKnown RBP10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 BSPRYQ5W0U4 402 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 PM20D1Q6GTS8 502 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 STRADAQ7RTN6 431 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 MAP7D3Q8IWC1 876 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 TTC9BQ8N6N2 239 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 CEP112Q8N8E3 955 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 KREMEN2Q8NCW0 462 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 SCAMP5Q8TAC9 235 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 MAIP1Q8WWC4 291 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 OVCA2Q8WZ82 227 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 CAPZA3Q96KX2 299 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 SERPINB11Q96P15 392 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 OSBPL9Q96SU4 736 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 TRIM7Q9C029 511 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 PLEKHA4Q9H4M7 779 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 RRAGDQ9NQL2 400 aaPredicted RBP10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 DDIT4Q9NX09 232 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 TRPM5Q9NZQ8 1165 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 RNF14Q9UBS8 474 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 TMEM59LQ9UK28 342 aa10.73□□□□□ -0.69
PRPF38A-202ENST00000474048 A0A1W2PQH9 124 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PGRMC1O00264 195 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 CES2O00748 559 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 ABCB7O75027 752 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 LINC00271P0C7V0 271 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 SPATA31D3P0C874 917 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PRLRP16471 622 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 CXCR5P32302 372 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 TAF10Q12962 218 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 C15orf59Q2T9L4 293 aaPredicted RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 EFHC2Q5JST6 749 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 C10orf120Q5SQS8 335 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 LRRC38Q5VT99 294 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 SPATA31D4Q6ZUB0 917 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 POLNQ7Z5Q5 900 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 KCTD6Q8NC69 237 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 HSPH1Q92598 858 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 EDEM1Q92611 657 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 HES6Q96HZ4 224 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PIWIL1Q96J94 861 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC2A13Q96QE2 648 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 DDX23Q9BUQ8 820 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 TLR10Q9BXR5 811 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 MAK16Q9BXY0 300 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 CARD9Q9H257 536 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 TLE6Q9H808 572 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 ASAH2Q9NR71 780 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 TMEM30AQ9NV96 361 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 GMIPQ9P107 970 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PCSK1NQ9UHG2 260 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC12A6Q9UHW9 1150 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 CDC23Q9UJX2 597 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 FBXW11Q9UKB1 542 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 USP18Q9UMW8 372 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PCDHA3Q9Y5H8 950 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 USP3Q9Y6I4 520 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
PRPF38A-202ENST00000474048 LRRD1A4D1F6 860 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CTAGE15A4D2H0 777 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 HIDE1A8MVS5 230 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 TNFRSF10BO14763 440 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 LRCH4O75427 683 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 ZRANB2O95218 330 aaKnown RBP eCLIP10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 SEC24AO95486 1093 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 C1RP00736 705 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 APOEP02649 317 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CTAGE8P0CG41 777 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC2A3P11169 496 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 ATF6P18850 670 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 MIPP30301 263 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CDC25CP30307 473 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 KPNA1P52294 538 aaPredicted RBP10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 AIF1P55008 147 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 TAF5Q15542 800 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 LONRF2Q1L5Z9 754 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CCDC14Q49A88 953 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 ARHGAP15Q53QZ3 475 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 BOLA3Q53S33 107 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms