RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ANKS1BQ7Z6G8 1248 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-212ENST00000473961 TRABD2AQ86V40 505 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 IZUMO1Q8IYV9 350 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 ABRAQ8N0Z2 381 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 TCP11L2Q8N4U5 519 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.8□□□□□ -1.64
BRCA1-212ENST00000473961 B3GALNT2Q8NCR0 500 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 SIMC1Q8NDZ2 872 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 TMEM171Q8WVE6 324 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 OVCA2Q8WZ82 227 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 WDR24Q96S15 920 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 NEU1Q99519 415 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 GLOD4Q9HC38 313 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 SERTAD3Q9UJW9 196 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 SUFUQ9UMX1 484 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 SORCS3Q9UPU3 1222 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 CHST2Q9Y4C5 530 aa4.8□□□□□ -1.64
BRCA1-212ENST00000473961 SAC3D1A6NKF1 404 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 B9A039 149 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 E7EVH7 732 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 ZNF185O15231 689 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 FOXS1O43638 330 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 ITGB3P05106 788 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 ACO1P21399 889 aaKnown RBP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 RXRGP48443 463 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 RBM5P52756 815 aaKnown RBP eCLIP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 CBFBQ13951 182 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 GRM4Q14833 912 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 DLGAP5Q15398 846 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 SMAD1Q15797 465 aaKnown RBP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 TBC1D10BQ4KMP7 808 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 MZT2BQ6NZ67 158 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 CLEC9AQ6UXN8 241 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 RRAGAQ7L523 313 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 NME8Q8N427 588 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 SUN3Q8TAQ9 357 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 NOC3LQ8WTT2 800 aaKnown RBP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 HTRA1Q92743 480 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 RSPRY1Q96DX4 576 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 LRIG1Q96JA1 1093 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 FAR2Q96K12 515 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 ALOXE3Q9BYJ1 711 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 VPS16Q9H269 839 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 VPS45Q9NRW7 570 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 TMEM74BQ9NUR3 256 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 FBXO28Q9NVF7 368 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 TBX20Q9UMR3 447 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 CNTN6Q9UQ52 1028 aa4.79□□□□□ -1.64
BRCA1-212ENST00000473961 UBE2J1Q9Y385 318 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 LAS1LQ9Y4W2 734 aaKnown RBP4.79□□□□□ -1.64
BRCA1-212ENST00000473961 XDHP47989 1333 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 PATE3B3GLJ2 98 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 KRT38O76015 456 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CDKL5O76039 1030 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 WDR47O94967 919 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 DDX58O95786 925 aaKnown RBP4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CSF1RP07333 972 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 LDHCP07864 332 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 FAM163BP0C2L3 166 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 TMEM225BP0DP42 221 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 MMP8P22894 467 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 ADORA2AP29274 412 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 VAV2P52735 878 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 TIRAPP58753 221 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 EIF4A1P60842 406 aaKnown RBP4.78□□□□□ -1.64
BRCA1-212ENST00000473961 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.78□□□□□ -1.64
BRCA1-212ENST00000473961 SF3A3Q12874 501 aaKnown RBP eCLIP4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CYP2A13Q16696 494 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 FAM180BQ6P0A1 224 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 MAMDC4Q6UXC1 1216 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 Q6ZRM9 215 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 C1orf122Q6ZSJ8 110 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 BBS12Q6ZW61 710 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CPOQ8IVL8 374 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 FAM109AQ8N4B1 249 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 FSIP1Q8NA03 581 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 OR1N1Q8NGS0 311 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 ATG4AQ8WYN0 398 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 EDAQ92838 391 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 RILPL2Q969X0 211 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 ZBTB10Q96DT7 871 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 REXO5Q96IC2 774 aaKnown RBP4.78□□□□□ -1.64
BRCA1-212ENST00000473961 TWNKQ96RR1 684 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 C17orf80Q9BSJ5 609 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 GPR63Q9BZJ6 419 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CCDC134Q9H6E4 229 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 CHODLQ9H9P2 273 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 RXFP3Q9NSD7 469 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 GGA3Q9NZ52 723 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 ARHGAP26Q9UNA1 814 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 DRG1Q9Y295 367 aaKnown RBP4.78□□□□□ -1.64
BRCA1-212ENST00000473961 SLC27A6Q9Y2P4 619 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 RABGAP1Q9Y3P9 1069 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms