RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.33
DDX56-209ENST00000473924 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 DNMT3LQ9UJW3 386 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 LUC7L2Q9Y383 392 aaKnown RBP13.02□□□□□ -0.33
DDX56-209ENST00000473924 ITIH6Q6UXX5 1313 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 PI4K2BG5E9Z4 385 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 LEFTY2O00292 366 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 CHADO15335 359 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 LTFP02788 710 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 TPM1P09493 284 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 CDH5P33151 784 aaPredicted RBP13.01□□□□□ -0.33
DDX56-209ENST00000473924 ZBED6P86452 979 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 FMO1Q01740 532 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 FCHO2Q0JRZ9 810 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 EFEMP1Q12805 493 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 TRIM14Q14142 442 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 MTF1Q14872 753 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 OR6B2Q6IFH4 312 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 KLHDC10Q6PID8 442 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 BHLHA9Q7RTU4 235 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 IRF2BP2Q7Z5L9 587 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 MIB1Q86YT6 1006 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 CPA5Q8WXQ8 436 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 EDEM1Q92611 657 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 AGPAT1Q99943 283 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 TRIM62Q9BVG3 475 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 SLC2A4RGQ9NR83 387 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
DDX56-209ENST00000473924 AIPL1Q9NZN9 384 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 CFAP97Q9P2B7 532 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 TJP2Q9UDY2 1190 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 STRIP2Q9ULQ0 834 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 CAPN11Q9UMQ6 739 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
DDX56-209ENST00000473924 TTC28Q96AY4 2481 aa13□□□□□ -0.33
DDX56-209ENST00000473924 NCOR1O75376 2440 aa13□□□□□ -0.33
DDX56-209ENST00000473924 CAPN9O14815 690 aa13□□□□□ -0.33
DDX56-209ENST00000473924 MDM4O15151 490 aa13□□□□□ -0.33
DDX56-209ENST00000473924 PAPSS1O43252 624 aaPredicted RBP13□□□□□ -0.33
DDX56-209ENST00000473924 ERBB2P04626 1255 aa13□□□□□ -0.33
DDX56-209ENST00000473924 GYPCP04921 128 aa13□□□□□ -0.33
DDX56-209ENST00000473924 IRF1P10914 325 aa13□□□□□ -0.33
DDX56-209ENST00000473924 TCF3P15923 654 aa13□□□□□ -0.33
DDX56-209ENST00000473924 CHRNB2P17787 502 aa13□□□□□ -0.33
DDX56-209ENST00000473924 TNFAIP3P21580 790 aa13□□□□□ -0.33
DDX56-209ENST00000473924 CASP14P31944 242 aa13□□□□□ -0.33
DDX56-209ENST00000473924 NOMO3P69849 1222 aa13□□□□□ -0.33
DDX56-209ENST00000473924 SIGLEC14Q08ET2 396 aa13□□□□□ -0.33
DDX56-209ENST00000473924 KLHL30Q0D2K2 578 aa13□□□□□ -0.33
DDX56-209ENST00000473924 USP4Q13107 963 aa13□□□□□ -0.33
DDX56-209ENST00000473924 ZNF77Q15935 545 aa13□□□□□ -0.33
DDX56-209ENST00000473924 PTPN20Q4JDL3 420 aa13□□□□□ -0.33
DDX56-209ENST00000473924 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
DDX56-209ENST00000473924 HFE2Q6ZVN8 426 aa13□□□□□ -0.33
DDX56-209ENST00000473924 VSTM4Q8IW00 320 aa13□□□□□ -0.33
DDX56-209ENST00000473924 ZNF276Q8N554 614 aa13□□□□□ -0.33
DDX56-209ENST00000473924 C18orf8Q96DM3 657 aa13□□□□□ -0.33
DDX56-209ENST00000473924 ZFYVE19Q96K21 471 aa13□□□□□ -0.33
DDX56-209ENST00000473924 EPHX3Q9H6B9 360 aa13□□□□□ -0.33
DDX56-209ENST00000473924 HAUS4Q9H6D7 363 aa13□□□□□ -0.33
DDX56-209ENST00000473924 GKN1Q9NS71 199 aa13□□□□□ -0.33
DDX56-209ENST00000473924 MARCH2Q9P0N8 246 aa13□□□□□ -0.33
DDX56-209ENST00000473924 CA14Q9ULX7 337 aa13□□□□□ -0.33
DDX56-209ENST00000473924 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
DDX56-209ENST00000473924 HELZP42694 1942 aaKnown RBP13□□□□□ -0.33
DDX56-209ENST00000473924 AP5Z1O43299 807 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 CYP1A1P04798 512 aaPredicted RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 NCAM1P13591 858 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 NSFP46459 744 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 IFNAR2P48551 515 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 YWHAZP63104 245 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 COG7P83436 770 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 ZXDBP98169 803 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 EFHC1Q5JVL4 640 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 FAM183BPQ6ZVS7 135 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 ZDHHC17Q8IUH5 632 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 RIN3Q8TB24 985 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 OSCP1Q8WVF1 389 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 DNASE1L2Q92874 299 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 KLF16Q9BXK1 252 aaPredicted RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 POPDC2Q9HBU9 364 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 DUS2Q9NX74 493 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 WNT16Q9UBV4 365 aa12.99□□□□□ -0.33
DDX56-209ENST00000473924 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
DDX56-209ENST00000473924 SLC12A8A0AV02 714 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 SLC9A3R1O14745 358 aaPredicted RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
DDX56-209ENST00000473924 GLI1P08151 1106 aa12.98□□□□□ -0.33
DDX56-209ENST00000473924 HMBSP08397 361 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms