RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ZNF606Q8WXB4 792 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 RBM12Q9NTZ6 932 aaKnown RBP19.89■□□□□ 0.77
PTCD3-210ENST00000473829 LIMA1Q9UHB6 759 aaKnown RBP19.89■□□□□ 0.77
PTCD3-210ENST00000473829 CYTH4Q9UIA0 394 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 MYOFQ9NZM1 2061 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 E2F8A0AVK6 867 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 SYCE3A1L190 88 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 YJEFN3A6XGL0 299 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 E7ENQ6 273 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 H0Y858 1186 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 CYP17A1P05093 508 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 ATP1A3P13637 1013 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 RPS9P46781 194 aaKnown RBP19.88■□□□□ 0.77
PTCD3-210ENST00000473829 COPB1P53618 953 aaKnown RBP19.88■□□□□ 0.77
PTCD3-210ENST00000473829 PTPN5P54829 565 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 GAB4Q2WGN9 574 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 KLHDC10Q6PID8 442 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 BBS7Q8IWZ6 715 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 DHX40Q8IX18 779 aaKnown RBP19.88■□□□□ 0.77
PTCD3-210ENST00000473829 SIX6OS1Q8N1H7 587 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 ZNF276Q8N554 614 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 KIAA1958Q8N8K9 716 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 CLEC4CQ8WTT0 213 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 NAA15Q9BXJ9 866 aaKnown RBP19.88■□□□□ 0.77
PTCD3-210ENST00000473829 GANQ9H2C0 597 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 FBRSL1Q9HCM7 1045 aaKnown RBP19.88■□□□□ 0.77
PTCD3-210ENST00000473829 CACNA1HO95180 2353 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 MYO15AQ9UKN7 3530 aa19.88■□□□□ 0.77
PTCD3-210ENST00000473829 CACNA1IQ9P0X4 2223 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 EPHB6O15197 1021 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 NFATC1O95644 943 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 RALAP11233 206 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 UCHL3P15374 230 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 CLCN1P35523 988 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 DAOAP59103 153 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 NHLH1Q02575 133 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 RAPGEF1Q13905 1077 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 DRAP1Q14919 205 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-210ENST00000473829 ANGPT1Q15389 498 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 C1orf228Q6PIY5 440 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 MIB1Q86YT6 1006 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 FAM71AQ8IYT1 594 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 SCML4Q8N228 414 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 ARHGAP18Q8N392 663 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 BPIFA3Q9BQP9 254 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 LMAN1LQ9HAT1 526 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 CNGB3Q9NQW8 809 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 RASAL2Q9UJF2 1139 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 DNMT3LQ9UJW3 386 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 SH3BP1Q9Y3L3 701 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 KIAA1549LQ6ZVL6 1849 aa19.87■□□□□ 0.77
PTCD3-210ENST00000473829 LGALS16A8MUM7 142 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 MED7O43513 233 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 RPL34P49207 117 aaKnown RBP19.86■□□□□ 0.77
PTCD3-210ENST00000473829 EFEMP1Q12805 493 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 CCINQ13939 588 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 GAS6Q14393 721 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 MEA1Q16626 185 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 FSTL4Q6MZW2 842 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 Q6ZS52 159 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 SLC47A2Q86VL8 602 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 MAML2Q8IZL2 1156 aaPredicted RBP19.86■□□□□ 0.77
PTCD3-210ENST00000473829 ADGRG2Q8IZP9 1017 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 HSFY1Q96LI6 401 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 NAT10Q9H0A0 1025 aaKnown RBP19.86■□□□□ 0.77
PTCD3-210ENST00000473829 CHRDQ9H2X0 955 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 PLCB1Q9NQ66 1216 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 FAM86C1Q9NVL1 165 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 SIK3Q9Y2K2 1263 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 VPS13AQ96RL7 3174 aa19.86■□□□□ 0.77
PTCD3-210ENST00000473829 TRDMT1O14717 391 aaKnown RBP19.85■□□□□ 0.77
PTCD3-210ENST00000473829 SLC9A3R1O14745 358 aaPredicted RBP19.85■□□□□ 0.77
PTCD3-210ENST00000473829 NCAM2O15394 837 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 STC2O76061 302 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 MAGEA9P43362 315 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 MTAPQ13126 283 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 DHCR24Q15392 516 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 TMEM196Q5HYL7 178 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 BSPRYQ5W0U4 402 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 RHBDF2Q6PJF5 856 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 TADA2BQ86TJ2 420 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 PASD1Q8IV76 773 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 C1orf210Q8IVY1 113 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 EDEM1Q92611 657 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 EZH1Q92800 747 aaPredicted RBP19.85■□□□□ 0.77
PTCD3-210ENST00000473829 MIS12Q9H081 205 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 SPATA6Q9NWH7 488 aaPredicted RBP19.85■□□□□ 0.77
PTCD3-210ENST00000473829 TJP2Q9UDY2 1190 aa19.85■□□□□ 0.77
PTCD3-210ENST00000473829 DMDP11532 3685 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 LRRC10BA6NIK2 292 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 TPM2P07951 284 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 HMBSP08397 361 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 OPRD1P41143 372 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 ZNF165P49910 485 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 GALK1P51570 392 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 SYCP1Q15431 976 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 FKBP15Q5T1M5 1219 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 BTBD8Q5XKL5 378 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 Q6ZNB5 142 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 HTR3DQ70Z44 454 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms