RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	ANO4	Q32M45	955 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	TPGS1	Q6ZTW0	290 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	BRAP	Q7Z569	592 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	PDZD3	Q86UT5	571 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	PDILT	Q8N807	584 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	MYO18A	Q92614	2054 aa	Known RBP	10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	BHMT	Q93088	406 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	CCDC127	Q96BQ5	260 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	CGRRF1	Q99675	332 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	MKRN2	Q9H000	416 aa	Known RBP	10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	SNX25	Q9H3E2	840 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	NMUR1	Q9HB89	426 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	AGPAT3	Q9NRZ7	376 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	DNAJC17	Q9NVM6	304 aa	Known RBP	10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	PLK2	Q9NYY3	685 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	DEC1	Q9P2X7	70 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	NXF1	Q9UBU9	619 aa	Known RBP	10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	SMC3	Q9UQE7	1217 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	RAX	Q9Y2V3	346 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345		A8MXQ7	604 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	NEDD8-MDP1	E9PL57	170 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	CACNG3	O60359	315 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	BMP15	O95972	392 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	TNNC2	P02585	160 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	KLKB1	P03952	638 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	TYR	P14679	529 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	PPP3CC	P48454	512 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	EHHADH	Q08426	723 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	PSMD6	Q15008	389 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	MAPRE1	Q15691	268 aa	Known RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	SNRNP35	Q16560	246 aa	Known RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	HECTD3	Q5T447	861 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	SCARA5	Q6ZMJ2	495 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345		Q6ZNB5	142 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	NAXD	Q8IW45	347 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	NELFCD	Q8IXH7	590 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	HDDC3	Q8N4P3	179 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	C1orf216	Q8TAB5	229 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	CCDC26	Q8TAB7	109 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	ZNF507	Q8TCN5	953 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	SCFD1	Q8WVM8	642 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	SLITRK1	Q96PX8	696 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	TWNK	Q96RR1	684 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	DUSP9	Q99956	384 aa	Known RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	ELOVL4	Q9GZR5	314 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	TBC1D14	Q9P2M4	693 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	PCOLCE2	Q9UKZ9	415 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	BTBD3	Q9Y2F9	522 aa		10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.19	□□□□□ -0.78
MCF2L-223	ENST00000473345		A0A1W2PQD8	194 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	VPS37C	A5D8V6	355 aa	Predicted RBP	10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	CYP26A1	O43174	497 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	DKK1	O94907	266 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	ATXN1L	P0C7T5	689 aa	Known RBP	10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	STAT6	P42226	847 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	IL12RB1	P42701	662 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	CYP2J2	P51589	502 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	DLG4	P78352	724 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	GEN1	Q17RS7	908 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	ZNF423	Q2M1K9	1284 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	PLEKHG6	Q3KR16	790 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	FUT11	Q495W5	492 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	KCNT1	Q5JUK3	1230 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	TMEM215	Q68D42	235 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	GRAMD4	Q6IC98	578 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	LAYN	Q6UX15	382 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	HTR3D	Q70Z44	454 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	SCD5	Q86SK9	330 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	ACOT1	Q86TX2	421 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	CHPF	Q8IZ52	775 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	C12orf29	Q8N999	325 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	CEP76	Q8TAP6	659 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	OTUB2	Q96DC9	234 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	UPF2	Q9HAU5	1272 aa	Known RBP	10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	KRT82	Q9NSB4	513 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	KBTBD4	Q9NVX7	518 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	WSB2	Q9NYS7	404 aa	Predicted RBP	10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	MARK1	Q9P0L2	795 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	CCDC39	Q9UFE4	941 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	FBXO10	Q9UK96	956 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	SH3BP1	Q9Y3L3	701 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	KIF3A	Q9Y496	699 aa		10.18	□□□□□ -0.78
MCF2L-223	ENST00000473345	PTPRB	P23467	1997 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	FAM149A	A5PLN7	773 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	TLR5	O60602	858 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	AP1G2	O75843	785 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	STAU1	O95793	577 aa	Known RBP	10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	C4BPA	P04003	597 aa	Known RBP	10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	TNNI1	P19237	187 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	TUB	P50607	506 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	COPA	P53621	1224 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	ATXN3	P54252	364 aa	Predicted RBP	10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	CLDN6	P56747	220 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	CAMK2B	Q13554	666 aa		10.17	□□□□□ -0.78
MCF2L-223	ENST00000473345	CUL4A	Q13619	759 aa		10.17	□□□□□ -0.78

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