RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IRGCQ6NXR0 463 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 TSHZ1Q6ZSZ6 1077 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 FBXO27Q8NI29 283 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 GPR20Q99678 358 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 MMADHCQ9H3L0 296 aaPredicted RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 RSAD1Q9HA92 442 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 SPATS2LQ9NUQ6 558 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 TTLL3Q9Y4R7 772 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 B2RBV5 119 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 ENO1P06733 434 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 AMPD1P23109 780 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 SP100P23497 879 aaPredicted RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 NOMO1Q15155 1222 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 HSF5Q4G112 596 aaPredicted RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 LBX2Q6XYB7 198 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 TREML1Q86YW5 311 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 SPDYE1Q8NFV5 336 aaPredicted RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 CFAP61Q8NHU2 1237 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 RXFP2Q8WXD0 754 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 CPB2Q96IY4 423 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 HEXIM2Q96MH2 286 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 STX18Q9P2W9 335 aaKnown RBP21.94■■□□□ 1.1
COL18A1-207ENST00000473212 WASF2Q9Y6W5 498 aa21.94■■□□□ 1.1
COL18A1-207ENST00000473212 POLR2AP24928 1970 aaKnown RBP21.93■■□□□ 1.1
COL18A1-207ENST00000473212 TRIP11Q15643 1979 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 CCDC195A0A1B0GUA6 201 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 H3BRJ5 948 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 CYB561D2O14569 222 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 IL1BP01584 269 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 C1QAP02745 245 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 SKIP12755 728 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 EDNRBP24530 442 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 YWHAZP63104 245 aaKnown RBP21.93■■□□□ 1.1
COL18A1-207ENST00000473212 CA9Q16790 459 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 SCYL2Q6P3W7 929 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 CHST13Q8NET6 341 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 FAM161BQ96MY7 647 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 SLC13A1Q9BZW2 595 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 CXCL16Q9H2A7 254 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 SMYD2Q9NRG4 433 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 WDR35Q9P2L0 1181 aa21.93■■□□□ 1.1
COL18A1-207ENST00000473212 F5H423 210 aaPredicted RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 I3L4J1 428 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 ACKR2O00590 384 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 KLF11O14901 512 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 SPAG6O75602 509 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 TMPRSS15P98073 1019 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 BST1Q10588 318 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 THEMIS2Q5TEJ8 643 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 CXorf38Q8TB03 319 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 MCRS1Q96EZ8 462 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 RPF1Q9H9Y2 349 aaKnown RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 USP29Q9HBJ7 922 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 PLLPQ9Y342 182 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 KCNN4O15554 427 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 CILPO75339 1184 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 NPTXRO95502 500 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 HMGCRP04035 888 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 KITP10721 976 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 RPS12P25398 132 aaKnown RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 MBTD1Q05BQ5 628 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 SMAD1Q15797 465 aaKnown RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 GJC2Q5T442 439 aaPredicted RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 OR6B2Q6IFH4 312 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 FAM183BPQ6ZVS7 135 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 ARID3BQ8IVW6 561 aaPredicted RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 FBXO16Q8IX29 292 aaPredicted RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 TMEM176AQ96HP8 235 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 FZD8Q9H461 694 aa21.92■■□□□ 1.1
COL18A1-207ENST00000473212 PPARGC1AQ9UBK2 798 aaKnown RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 MARCOQ9UEW3 520 aaPredicted RBP21.92■■□□□ 1.1
COL18A1-207ENST00000473212 IGKV6-21A0A0C4DH24 114 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 NOP56O00567 594 aaKnown RBP21.91■■□□□ 1.1
COL18A1-207ENST00000473212 CHADO15335 359 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 SMIM24O75264 130 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 SNRPAP09012 282 aaKnown RBP21.91■■□□□ 1.1
COL18A1-207ENST00000473212 PDGFRAP16234 1089 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 TFE3P19532 575 aaPredicted RBP21.91■■□□□ 1.1
COL18A1-207ENST00000473212 IL4RP24394 825 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 RBL1P28749 1068 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 MRPS5P82675 430 aaKnown RBP21.91■■□□□ 1.1
COL18A1-207ENST00000473212 SATB1Q01826 763 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 AP1B1Q10567 949 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 MXD4Q14582 209 aaPredicted RBP21.91■■□□□ 1.1
COL18A1-207ENST00000473212 SURF1Q15526 300 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 EFCAB12Q6NXP0 572 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 CCDC110Q8TBZ0 833 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 ACAP3Q96P50 834 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 RNF19AQ9NV58 838 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 KCNK4Q9NYG8 393 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 ZC3H7BQ9UGR2 993 aaKnown RBP21.91■■□□□ 1.1
COL18A1-207ENST00000473212 SOCS7O14512 581 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 KRT37O76014 449 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 WDR78Q5VTH9 848 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 ARHGAP24Q8N264 748 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 E2F7Q96AV8 911 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 LPIN3Q9BQK8 851 aa21.91■■□□□ 1.1
COL18A1-207ENST00000473212 PNPLA8Q9NP80 782 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms