RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GOLGA1Q92805 767 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 ZFRQ96KR1 1074 aaKnown RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 FAM81BQ96LP2 452 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 XPO6Q96QU8 1125 aaKnown RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 KLF16Q9BXK1 252 aaPredicted RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 INTS2Q9H0H0 1204 aaKnown RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 NMUR1Q9HB89 426 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 ARHGEF4Q9NR80 690 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 SPHK2Q9NRA0 654 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 RASAL2Q9UJF2 1139 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 NUDT5Q9UKK9 219 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 ZNF510Q9Y2H8 683 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 TBC1D3BA6NDS4 549 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 K7ESF4 209 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 KAT7O95251 611 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 HOXA6P31267 233 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 GRIA2P42262 883 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 PGFP49763 221 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 YWHAGP61981 247 aaKnown RBP eCLIP20.42■□□□□ 0.86
COMMD1-208ENST00000472729 EFEMP1Q12805 493 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 TTC30AQ86WT1 665 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 GPR161Q8N6U8 529 aaKnown RBP20.42■□□□□ 0.86
COMMD1-208ENST00000472729 SUMF1Q8NBK3 374 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 RBBP8NLQ8NC74 664 aaPredicted RBP20.42■□□□□ 0.86
COMMD1-208ENST00000472729 CNOT6LQ96LI5 555 aaKnown RBP20.42■□□□□ 0.86
COMMD1-208ENST00000472729 OSER1Q9NX31 292 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 WDR35Q9P2L0 1181 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 DEC1Q9P2X7 70 aa20.42■□□□□ 0.86
COMMD1-208ENST00000472729 TDGF1P13385 188 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 OPRD1P41143 372 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 MFAP3P55082 362 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 LCLAT1Q6UWP7 414 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 SYT13Q7L8C5 426 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.41■□□□□ 0.86
COMMD1-208ENST00000472729 ZNF276Q8N554 614 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 NAT16Q8N8M0 369 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 DCLK3Q9C098 648 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 UBE2TQ9NPD8 197 aaPredicted RBP20.41■□□□□ 0.86
COMMD1-208ENST00000472729 OLA1Q9NTK5 396 aaKnown RBP20.41■□□□□ 0.86
COMMD1-208ENST00000472729 MIA3Q5JRA6 1907 aa20.41■□□□□ 0.86
COMMD1-208ENST00000472729 NEDD8-MDP1E9PL57 170 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 M0QYV0 167 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 O00370 1275 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 MDM4O15151 490 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 MED7O43513 233 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 APBB3O95704 486 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 HMBSP08397 361 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 LCP1P13796 627 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 SLC6A11P48066 632 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 PXNP49023 591 aaPredicted RBP20.4■□□□□ 0.86
COMMD1-208ENST00000472729 MRPS21P82921 87 aaKnown RBP20.4■□□□□ 0.86
COMMD1-208ENST00000472729 KDSRQ06136 332 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 DMC1Q14565 340 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 CNGA2Q16280 664 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 LPAL2Q16609 132 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 RAB41Q5JT25 222 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 GBP6Q6ZN66 633 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 TPGS1Q6ZTW0 290 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 ENOSF1Q7L5Y1 443 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 SCD5Q86SK9 330 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 WDR5BQ86VZ2 330 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 KIAA2013Q8IYS2 634 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 TSTD1Q8NFU3 115 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 BBS2Q9BXC9 721 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 ULBP1Q9BZM6 244 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 MARCH2Q9P0N8 246 aa20.4■□□□□ 0.86
COMMD1-208ENST00000472729 CCDC163A0A0D9SF12 145 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 PES1O00541 588 aaKnown RBP20.39■□□□□ 0.85
COMMD1-208ENST00000472729 ZBTB24O43167 697 aaPredicted RBP20.39■□□□□ 0.85
COMMD1-208ENST00000472729 HOXC11O43248 304 aaPredicted RBP20.39■□□□□ 0.85
COMMD1-208ENST00000472729 ALDH1A2O94788 518 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 CHKAP35790 457 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 USP8P40818 1118 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 DMWDQ09019 674 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 ADIGQ0VDE8 80 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 LAIR1Q6GTX8 287 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 PKN3Q6P5Z2 889 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 TMEM25Q86YD3 366 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 LMO3Q8TAP4 145 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 HHIPQ96QV1 700 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 C2orf42Q9NWW7 574 aa20.39■□□□□ 0.85
COMMD1-208ENST00000472729 SLC12A8A0AV02 714 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 K7EQS6 105 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 AXIN1O15169 862 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 RPP40O75818 363 aaKnown RBP20.38■□□□□ 0.85
COMMD1-208ENST00000472729 CYBBP04839 570 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 BRD2P25440 801 aaKnown RBP20.38■□□□□ 0.85
COMMD1-208ENST00000472729 ERCC5P28715 1186 aaPredicted RBP20.38■□□□□ 0.85
COMMD1-208ENST00000472729 TNFRSF4P43489 277 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 HARS2P49590 506 aaKnown RBP20.38■□□□□ 0.85
COMMD1-208ENST00000472729 EXOC3L4Q17RC7 722 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 HSF5Q4G112 596 aaPredicted RBP20.38■□□□□ 0.85
COMMD1-208ENST00000472729 PM20D1Q6GTS8 502 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 GRAMD4Q6IC98 578 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 TRMT11Q7Z4G4 463 aaKnown RBP20.38■□□□□ 0.85
COMMD1-208ENST00000472729 ARHGEF19Q8IW93 802 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 UBR7Q8N806 425 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 USP33Q8TEY7 942 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 KCTD13Q8WZ19 329 aa20.38■□□□□ 0.85
COMMD1-208ENST00000472729 KAT5Q92993 513 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms