RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SLC12A2P55011 1212 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ADARP55265 1226 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 CAMK2DQ13557 499 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 WTAPQ15007 396 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 WDR72Q3MJ13 1102 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ZNF805Q5CZA5 627 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 IL27RAQ6UWB1 636 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 UNC5DQ6UXZ4 953 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ETV3LQ6ZN32 361 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 BBS12Q6ZW61 710 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ZNF572Q7Z3I7 529 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 KDELC2Q7Z4H8 507 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 NLRX1Q86UT6 975 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ARMC8Q8IUR7 673 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 RASGRP3Q8IV61 690 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 LSM14AQ8ND56 463 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 ZMIZ2Q8NF64 920 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 OR6Y1Q8NGX8 325 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CALML6Q8TD86 181 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CCDC34Q96HJ3 373 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CDHR1Q96JP9 859 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 GORASP1Q9BQQ3 440 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 XPO4Q9C0E2 1151 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 RNF32Q9H0A6 362 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 TP63Q9H3D4 680 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 EPB41L4AQ9HCS5 686 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 TM7SF3Q9NS93 570 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 TRPC5Q9UL62 973 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 SMG5Q9UPR3 1016 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 PTRH2Q9Y3E5 179 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 SHANK2Q9UPX8 1470 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SHPRHQ149N8 1683 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PNMA6EA0A0J9YXQ4 647 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FAM90A7PA6NKC0 464 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FAM90A22PA8MWA6 464 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FAM90A12PA8MX19 464 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FAM90A23PA8MXZ1 464 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CHL1O00533 1208 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PPM1DO15297 605 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CA12O43570 354 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ADAMTS4O75173 837 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TBX10O75333 385 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 HMOX1P09601 288 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ACADMP11310 421 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FCER1AP12319 257 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 XRCC6P12956 609 aaKnown RBP eCLIP2.92□□□□□ -1.94
XRN1-210ENST00000472697 HTR7P34969 479 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PBX1P40424 430 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PRKCIP41743 596 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 NRG3P56975 720 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CORO7P57737 925 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ATP2C1P98194 919 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 SF3A3Q12874 501 aaKnown RBP eCLIP2.92□□□□□ -1.94
XRN1-210ENST00000472697 STILQ15468 1287 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FAXCQ5TGI0 409 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 GKAP1Q5VSY0 366 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 SLC2A7Q6PXP3 512 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 C16orf89Q6UX73 402 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PPP1R32Q7Z5V6 425 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 MON1AQ86VX9 555 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 MIB1Q86YT6 1006 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TRIM48Q8IWZ4 208 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CCDC150Q8NCX0 1101 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 OR6J1Q8NGC5 347 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TTLL11Q8NHH1 800 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PPP2R3CQ969Q6 453 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 EID2BQ96D98 161 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 FAM120BQ96EK7 910 aaKnown RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 SUCLG2Q96I99 432 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TTC14Q96N46 770 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 BAG1Q99933 345 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 MESP1Q9BRJ9 268 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TMEM8AQ9HCN3 771 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CDYLQ9Y232 598 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 DERAQ9Y315 318 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CDY1Q9Y6F8 540 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 MED14O60244 1454 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 LOC102723971A0A1B0GUV8 181 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 SLC38A8A6NNN8 435 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TRIM13O60858 407 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CUTAO60888 179 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 PDE8BO95263 885 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CLEC3BP05452 202 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CSF1RP07333 972 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ALOX12P18054 663 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 KLRC1P26715 233 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 IRAK1P51617 712 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ARF3P61204 181 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 ARF1P84077 181 aaKnown RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 TMEM115Q12893 351 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 MYO1EQ12965 1108 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ACVR2BQ13705 512 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 RUNX2Q13950 521 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 EIF4A2Q14240 407 aaKnown RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 SLC9B1Q4ZJI4 515 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TMEM196Q5HYL7 178 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 DPY19L3Q6ZPD9 716 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 RNF144BQ7Z419 303 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ZNF804AQ7Z570 1209 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms