RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CLEC4CQ8WTT0 213 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 NDRG1Q92597 394 aaKnown RBP17.65■□□□□ 0.42
CCM2-205ENST00000472223 TRPC7Q9HCX4 862 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 ZNF334Q9HCZ1 680 aaPredicted RBP17.65■□□□□ 0.42
CCM2-205ENST00000472223 WDR6Q9NNW5 1121 aaKnown RBP17.65■□□□□ 0.42
CCM2-205ENST00000472223 UVRAGQ9P2Y5 699 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 NENFQ9UMX5 172 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 TRAV19A0A0A6YYK7 116 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 KRT86O43790 486 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 GRAP2O75791 330 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 CYP1A2P05177 515 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 GBP1P32455 592 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 NOS2P35228 1153 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 ATP5C1P36542 298 aaKnown RBP17.64■□□□□ 0.41
CCM2-205ENST00000472223 LTBRP36941 435 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 TUBP50607 506 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 DLX2Q07687 328 aaPredicted RBP17.64■□□□□ 0.41
CCM2-205ENST00000472223 MAMLD1Q13495 774 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 DCAF6Q58WW2 860 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 C10orf120Q5SQS8 335 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 GPR158Q5T848 1215 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 ARCQ7LC44 396 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 DNAAF5Q86Y56 855 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 MAFAQ8NHW3 353 aaPredicted RBP17.64■□□□□ 0.41
CCM2-205ENST00000472223 FEZF2Q8TBJ5 459 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 MSLNLQ96KJ4 702 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 DESI2Q9BSY9 194 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 NUP85Q9BW27 656 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 S1PR5Q9H228 398 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 ADGRG1Q9Y653 693 aa17.64■□□□□ 0.41
CCM2-205ENST00000472223 CDH23Q9H251 3354 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.63■□□□□ 0.41
CCM2-205ENST00000472223 H3BQ06 376 aaPredicted RBP17.63■□□□□ 0.41
CCM2-205ENST00000472223 ZNF263O14978 683 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 ATMINO43313 823 aaPredicted RBP17.63■□□□□ 0.41
CCM2-205ENST00000472223 TLR5O60602 858 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 DAB1O75553 588 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 ZDHHC11BP0C7U3 371 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 PDGFRAP16234 1089 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 HDCP19113 662 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 SDC4P31431 198 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 AVPR1AP37288 418 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 MATKP42679 507 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 NTHL1P78549 312 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 PUS10Q3MIT2 529 aaKnown RBP17.63■□□□□ 0.41
CCM2-205ENST00000472223 GAREM2Q75VX8 874 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 SND1Q7KZF4 910 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCM2-205ENST00000472223 DEFB106AQ8N104 65 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 SMRP1Q8NCR6 262 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 RFFLQ8WZ73 363 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 EDEM1Q92611 657 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 MCEEQ96PE7 176 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 PACSIN1Q9BY11 444 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 LRRC3Q9BY71 257 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 TASP1Q9H6P5 420 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 IL21Q9HBE4 155 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.63■□□□□ 0.41
CCM2-205ENST00000472223 DNMT3LQ9UJW3 386 aa17.63■□□□□ 0.41
CCM2-205ENST00000472223 MYO1FO00160 1098 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 F9P00740 461 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 CKMP06732 381 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 GPD1P21695 349 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 KPNA1P52294 538 aaPredicted RBP17.62■□□□□ 0.41
CCM2-205ENST00000472223 CYP4F8P98187 520 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 SMAD4Q13485 552 aaKnown RBP17.62■□□□□ 0.41
CCM2-205ENST00000472223 TAF5Q15542 800 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 TEAD2Q15562 447 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 ARHGAP29Q52LW3 1261 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 HS1BP3Q53T59 392 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 GET4Q7L5D6 327 aaPredicted RBP17.62■□□□□ 0.41
CCM2-205ENST00000472223 SCD5Q86SK9 330 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 MAB21L3Q8N8X9 362 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 SHKBP1Q8TBC3 707 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 SLC35G2Q8TBE7 412 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 ZNF564Q8TBZ8 553 aaPredicted RBP17.62■□□□□ 0.41
CCM2-205ENST00000472223 NCAPGQ9BPX3 1015 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 KCNF1Q9H3M0 494 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 NMUR1Q9HB89 426 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCM2-205ENST00000472223 PAXBP1Q9Y5B6 917 aa17.62■□□□□ 0.41
CCM2-205ENST00000472223 ZFP37Q9Y6Q3 630 aaPredicted RBP17.62■□□□□ 0.41
CCM2-205ENST00000472223 A0A0A6YYK5 440 aaPredicted RBP17.61■□□□□ 0.41
CCM2-205ENST00000472223 RNF8O76064 485 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 MBL2P11226 248 aaPredicted RBP17.61■□□□□ 0.41
CCM2-205ENST00000472223 GJA1P17302 382 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 RFC1P35251 1148 aaPredicted RBP17.61■□□□□ 0.41
CCM2-205ENST00000472223 CBX2Q14781 532 aaPredicted RBP17.61■□□□□ 0.41
CCM2-205ENST00000472223 AAK1Q2M2I8 961 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 PRSS36Q5K4E3 855 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 TXNDC8Q6A555 127 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 KLHDC10Q6PID8 442 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 HFE2Q6ZVN8 426 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 RXFP2Q8WXD0 754 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 RNF34Q969K3 372 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 ACSF2Q96CM8 615 aaPredicted RBP17.61■□□□□ 0.41
CCM2-205ENST00000472223 SERPINB11Q96P15 392 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 SLC2A13Q96QE2 648 aa17.61■□□□□ 0.41
CCM2-205ENST00000472223 FAM204AQ9H8W3 233 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms