RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 TRMT1LQ7Z2T5 733 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 GLRX5Q86SX6 157 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 RALGPS2Q86X27 583 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 SLITRK4Q8IW52 837 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 MFSD6LQ8IWD5 586 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 RBM12BQ8IXT5 1001 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 EFCAB13Q8IY85 973 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 COLGALT2Q8IYK4 626 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 PHACTR4Q8IZ21 702 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 SYNPOQ8N3V7 929 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 LRRC71Q8N4P6 559 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 CAMKK1Q8N5S9 505 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 EXD3Q8N9H8 876 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 RPLP0P6Q8NHW5 317 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 ZSCAN18Q8TBC5 510 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 FRAT1Q92837 279 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 SMARCD2Q92925 531 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 EAF1Q96JC9 268 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 CCDC74BQ96LY2 380 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 FERD3LQ96RJ6 166 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 SEC62Q99442 399 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 TMEM175Q9BSA9 504 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 APOL6Q9BWW8 343 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 API5Q9BZZ5 524 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 CSRNP2Q9H175 543 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 C8orf33Q9H7E9 229 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 IL21RQ9HBE5 538 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 ZFP64Q9NPA5 681 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 CWC15Q9P013 229 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 FNIP2Q9P278 1114 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 KLHL3Q9UH77 587 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 MAPK8IP1Q9UQF2 711 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 OTOL1A6NHN0 477 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 GCOM1H8Y6P7 765 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 LEFTY1O75610 366 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 IGHDP01880 384 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 FGAP02671 866 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 AFPP02771 609 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 POLR2MP0CAP2 368 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 HARSP12081 509 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 HNRNPLP14866 589 aaKnown RBP eCLIP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 DARSP14868 501 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 TNFRSF8P28908 595 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 HOXA9P31269 272 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 CD97P48960 835 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 STAT5BP51692 787 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 MLLT6P55198 1093 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SESN3P58005 492 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 RACK1P63244 317 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 TLE1Q04724 770 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 GFPT1Q06210 699 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 ADCY2Q08462 1091 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SMAD1Q15797 465 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 IGFBP7Q16270 282 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 ALDH1L2Q3SY69 923 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 ARTNQ5T4W7 220 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 TWF2Q6IBS0 349 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 FUT10Q6P4F1 479 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 ATG14Q6ZNE5 492 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 UBE3DQ7Z6J8 389 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 TTC30AQ86WT1 665 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SRRM1Q8IYB3 904 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SLFN12Q8IYM2 578 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SHISA5Q8N114 240 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 URGCPQ8TCY9 931 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 HASPINQ8TF76 798 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SETD7Q8WTS6 366 aaKnown RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 CYB5D2Q8WUJ1 264 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 DEPDC1BQ8WUY9 529 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 RELTQ969Z4 430 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 GPRASP2Q96D09 838 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 MISP3Q96FF7 219 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 TMEM209Q96SK2 561 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 KIF2CQ99661 725 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 DPH2Q9BQC3 489 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 MIOSQ9NXC5 875 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 ETAA1Q9NY74 926 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 GMIPQ9P107 970 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 ZNF69Q9UC07 566 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 PLEKHB1Q9UF11 243 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 EBF1Q9UH73 591 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 SSX2IPQ9Y2D8 614 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 BTBD3Q9Y2F9 522 aa4.78□□□□□ -1.64
LMNB1-205ENST00000472034 POLR3KQ9Y2Y1 108 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-205ENST00000472034 BAZ2BQ9UIF8 2168 aaKnown RBP4.77□□□□□ -1.65
LMNB1-205ENST00000472034 TRIM64CA6NLI5 447 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 TMCO5BA8MYB1 307 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 CHADO15335 359 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 SUV39H1O43463 412 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 BRINP1O60477 761 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 SLITRK5O94991 958 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 BAG4O95429 457 aaKnown RBP4.77□□□□□ -1.65
LMNB1-205ENST00000472034 WNT11O96014 354 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 C1RP00736 705 aa4.77□□□□□ -1.65
LMNB1-205ENST00000472034 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms