RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZFPL1O95159 310 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 LARGE1O95461 756 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 MED14OSP0DP75 135 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 PGM1P36871 562 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 PBX1P40424 430 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 ANXA11P50995 505 aaKnown RBP7.42□□□□□ -1.22
SMC5-202ENST00000471372 SP2Q02086 613 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 TAP2Q03519 686 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 NFIXQ14938 502 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 BAK1Q16611 211 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 LY6KQ17RY6 165 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 CD300EQ496F6 205 aaPredicted RBP7.42□□□□□ -1.22
SMC5-202ENST00000471372 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 C1QL3Q5VWW1 255 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 ANO7Q6IWH7 933 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 ATG14Q6ZNE5 492 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 CCDC129Q6ZRS4 1044 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 H1FNTQ75WM6 255 aaPredicted RBP7.42□□□□□ -1.22
SMC5-202ENST00000471372 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.42□□□□□ -1.22
SMC5-202ENST00000471372 FAM124AQ86V42 546 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 METTL25Q8N6Q8 603 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 FAM71DQ8N9W8 422 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 RBM17Q96I25 401 aaKnown RBP7.42□□□□□ -1.22
SMC5-202ENST00000471372 C17orf80Q9BSJ5 609 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 LIN7CQ9NUP9 197 aaKnown RBP7.42□□□□□ -1.22
SMC5-202ENST00000471372 PLA2G3Q9NZ20 509 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 NFU1Q9UMS0 254 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 RCE1Q9Y256 329 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 ZBTB1Q9Y2K1 713 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 TTLL3Q9Y4R7 772 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 FER1L4A9Z1Z3 1794 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 F5H697 171 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ZNF185O15231 689 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ORC4O43929 436 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 TGM1P22735 817 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 CD6P30203 668 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 GGT5P36269 586 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 RPS19P39019 145 aaKnown RBP7.41□□□□□ -1.22
SMC5-202ENST00000471372 STAT1P42224 750 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 AFF3P51826 1226 aaKnown RBP7.41□□□□□ -1.22
SMC5-202ENST00000471372 FAM3BP58499 235 aaPredicted RBP7.41□□□□□ -1.22
SMC5-202ENST00000471372 OCA2Q04671 838 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 KIAA2012Q0VF49 1180 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 FZD5Q13467 585 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 NRN1LQ496H8 165 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ICE2Q659A1 982 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ARHGEF18Q6ZSZ5 1173 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 TAX1BP1Q86VP1 789 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ARMC8Q8IUR7 673 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 LRRC71Q8N4P6 559 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ATRIPQ8WXE1 791 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 APOPT1Q96IL0 206 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 HERC2P3Q9BVR0 1158 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 USP44Q9H0E7 712 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 ZCWPW1Q9H0M4 648 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 LMAN2LQ9H0V9 348 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 GHITMQ9H3K2 345 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 SEC61A2Q9H9S3 476 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 TBC1D29Q9UFV1 150 aa7.41□□□□□ -1.22
SMC5-202ENST00000471372 LOC105369274A0A096LPK9 316 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 LOC102723532A0A0G2JNH3 316 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 CTIFO43310 598 aaKnown RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 ERN1O75460 977 aaKnown RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 HEXIM1O94992 359 aaKnown RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 VNN1O95497 513 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 GPANK1O95872 356 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 KRT1P04264 644 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 DRD1P21728 446 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 CHMP24386 653 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 EPHA3P29320 983 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 MAPK4P31152 587 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 APOBEC3AP31941 199 aaPredicted RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 HOXD12P35452 270 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 MSX2P35548 267 aaPredicted RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 PSMC2P35998 433 aaKnown RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 NPTX2P47972 431 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 PDE6CP51160 858 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 PPP2CBP62714 309 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 PPP2CAP67775 309 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 RNASELQ05823 741 aaKnown RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 DYRK1AQ13627 763 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 ACOX1Q15067 660 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 PREPLQ4J6C6 727 aaPredicted RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 DCAF17Q5H9S7 520 aaPredicted RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 TMTC3Q6ZXV5 915 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 LRRC8DQ7L1W4 858 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 ENOSF1Q7L5Y1 443 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 CLNKQ7Z7G1 428 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 ADGRG5Q8IZF4 528 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 OR4N4Q8N0Y3 316 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 LINC01356Q8N9X3 169 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 TIGD1Q96MW7 591 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 GNRHR2Q96P88 292 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 PAAF1Q9BRP4 392 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 PHF7Q9BWX1 381 aaPredicted RBP7.4□□□□□ -1.22
SMC5-202ENST00000471372 ARHGAP39Q9C0H5 1083 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 MEGF9Q9H1U4 602 aa7.4□□□□□ -1.22
SMC5-202ENST00000471372 NSMCE4AQ9NXX6 385 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms