RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 MED10Q9BTT4 135 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 BBS2Q9BXC9 721 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 DNAI2Q9GZS0 605 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 DMAP1Q9NPF5 467 aaPredicted RBP11.99□□□□□ -0.49
MRPL40-203ENST00000471259 FSCN3Q9NQT6 498 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 TLR8Q9NR97 1041 aaKnown RBP11.99□□□□□ -0.49
MRPL40-203ENST00000471259 PANK4Q9NVE7 773 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 TBC1D7Q9P0N9 293 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 PCDHGB2Q9Y5G2 931 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
MRPL40-203ENST00000471259 SPEGQ15772 3267 aa11.99□□□□□ -0.49
MRPL40-203ENST00000471259 MYOFQ9NZM1 2061 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 PCDH15Q96QU1 1955 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 A0A1W2PQF6 199 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 RIOK3O14730 519 aaKnown RBP11.98□□□□□ -0.49
MRPL40-203ENST00000471259 HCRTO43612 131 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 CACNG3O60359 315 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
MRPL40-203ENST00000471259 DGKGP49619 791 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 WNT7BP56706 349 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 SNRPFP62306 86 aaKnown RBP11.98□□□□□ -0.49
MRPL40-203ENST00000471259 KCNA1Q09470 495 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 GRIK2Q13002 908 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 RABEP1Q15276 862 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 CCDC142Q17RM4 750 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 INAVAQ3KP66 663 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 HTR3DQ70Z44 454 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 TMPRSS7Q7RTY8 843 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 TRAPPC11Q7Z392 1133 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 BBS7Q8IWZ6 715 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 DNASE2BQ8WZ79 361 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 SMARCD1Q96GM5 515 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 PCED1AQ9H1Q7 454 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 MARK1Q9P0L2 795 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 PCOLCE2Q9UKZ9 415 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 ZNF510Q9Y2H8 683 aa11.98□□□□□ -0.49
MRPL40-203ENST00000471259 NEDD8-MDP1E9PL57 170 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 SCAMP3O14828 347 aaKnown RBP11.97□□□□□ -0.49
MRPL40-203ENST00000471259 SYNCRIPO60506 623 aaKnown RBP11.97□□□□□ -0.49
MRPL40-203ENST00000471259 PHACTR2O75167 634 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 CLSTN1O94985 981 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 ACADMP11310 421 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 P4HA1P13674 534 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 TYRP14679 529 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 ATP5C1P36542 298 aaKnown RBP11.97□□□□□ -0.49
MRPL40-203ENST00000471259 STAT6P42226 847 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 WASP42768 502 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 SLC5A3P53794 718 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 AMPD3Q01432 767 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 MESP2Q0VG99 397 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 EGFLAMQ63HQ2 1017 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 TMEM25Q86YD3 366 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 SFTPA1Q8IWL2 248 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 SCUBE3Q8IX30 993 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 OR5B17Q8NGF7 314 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 HNRNPLLQ8WVV9 542 aaKnown RBP11.97□□□□□ -0.49
MRPL40-203ENST00000471259 DNAJC19Q96DA6 116 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 MRGPRX1Q96LB2 322 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 CAMK1GQ96NX5 476 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 GAREM1Q9H706 876 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 PRDM16Q9HAZ2 1276 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 ZDHHC4Q9NPG8 344 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 TM7SF3Q9NS93 570 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 HSPBP1Q9NZL4 362 aa11.97□□□□□ -0.49
MRPL40-203ENST00000471259 CHORDC1Q9UHD1 332 aaPredicted RBP11.97□□□□□ -0.49
MRPL40-203ENST00000471259 FRMD3A2A2Y4 597 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 ANTXRLA6NF34 631 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 BCAT2O15382 392 aaPredicted RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 TLR5O60602 858 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 DLATP10515 647 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 IRF1P10914 325 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 NCAM1P13591 858 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 PDCP20941 246 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 CHKAP35790 457 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 AP3M2P53677 418 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 C19orf57Q0VDD7 668 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 TEAD4Q15561 434 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 SNRNP35Q16560 246 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 PDCD7Q8N8D1 485 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 PNPLA1Q8N8W4 532 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 OR2I1PQ8NGU4 316 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 RHBDD1Q8TEB9 315 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 PRCCQ92733 491 aaPredicted RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 EPSTI1Q96J88 318 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 UBL7Q96S82 380 aaPredicted RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 CDK5RAP1Q96SZ6 601 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 CGRRF1Q99675 332 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 MRPL45Q9BRJ2 306 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 NUP58Q9BVL2 599 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 B3GNT5Q9BYG0 378 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 ZNF518BQ9C0D4 1074 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 MIR1-1HGQ9H1L0 117 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 IKZF4Q9H2S9 585 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 ITM2CQ9NQX7 267 aa11.96□□□□□ -0.49
MRPL40-203ENST00000471259 WSB2Q9NYS7 404 aaPredicted RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 CGNQ9P2M7 1197 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 SRPRBQ9Y5M8 271 aaKnown RBP11.96□□□□□ -0.49
MRPL40-203ENST00000471259 DMXL2Q8TDJ6 3036 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms