RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ZMYND8Q9ULU4 1186 aaPredicted RBP6.47□□□□□ -1.37
SSB-209ENST00000470621 CA12O43570 354 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 SNX2O60749 519 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 IFIT2P09913 472 aaKnown RBP6.46□□□□□ -1.38
SSB-209ENST00000470621 EGR1P18146 543 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 HOXA4Q00056 320 aaPredicted RBP6.46□□□□□ -1.38
SSB-209ENST00000470621 ARHGAP15Q53QZ3 475 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 BCDIN3DQ7Z5W3 292 aaKnown RBP6.46□□□□□ -1.38
SSB-209ENST00000470621 RAB11FIP4Q86YS3 637 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 FSTL5Q8N475 847 aaPredicted RBP6.46□□□□□ -1.38
SSB-209ENST00000470621 SUN3Q8TAQ9 357 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 DEPTORQ8TB45 409 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 ZNF566Q969W8 418 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 DAZAP1Q96EP5 407 aaKnown RBP6.46□□□□□ -1.38
SSB-209ENST00000470621 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.46□□□□□ -1.38
SSB-209ENST00000470621 ZBTB26Q9HCK0 441 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 NLRC4Q9NPP4 1024 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 TRIM36Q9NQ86 728 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 NKX1-2Q9UD57 310 aaPredicted RBP6.46□□□□□ -1.38
SSB-209ENST00000470621 CDC23Q9UJX2 597 aa6.46□□□□□ -1.38
SSB-209ENST00000470621 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 TISP43B9A030 160 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 M0R3H8 397 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 CBFA2T3O75081 653 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 MYCLP12524 364 aaPredicted RBP6.45□□□□□ -1.38
SSB-209ENST00000470621 EIF4A1P60842 406 aaKnown RBP6.45□□□□□ -1.38
SSB-209ENST00000470621 MTAPQ13126 283 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 CLCA4Q14CN2 919 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 TMTC4Q5T4D3 741 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 PRAMEF17Q5VTA0 474 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 SUMO4Q6EEV6 95 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 DPY19L2P1Q6NXN4 242 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 CHSY1Q86X52 802 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 SFTPA1Q8IWL2 248 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 HASPINQ8TF76 798 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 NELL1Q92832 810 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 RITA1Q96K30 269 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 SNX27Q96L92 541 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 SNX18Q96RF0 628 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 MGAT4CQ9UBM8 478 aa6.45□□□□□ -1.38
SSB-209ENST00000470621 TCRBV5S1A1TA0A578 114 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 A8MVJ9 347 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 MASP2O00187 686 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 PODXLO00592 558 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 COQ9O75208 318 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 WDR47O94967 919 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 APEHP13798 732 aaKnown RBP6.44□□□□□ -1.38
SSB-209ENST00000470621 ZNF37AP17032 561 aaPredicted RBP6.44□□□□□ -1.38
SSB-209ENST00000470621 PBX1P40424 430 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 COPB1P53618 953 aaKnown RBP6.44□□□□□ -1.38
SSB-209ENST00000470621 UBE4AQ14139 1066 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 SLC5A9Q2M3M2 681 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 AWAT1Q58HT5 328 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.44□□□□□ -1.38
SSB-209ENST00000470621 MRNIPQ6NTE8 343 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 MTHFD1LQ6UB35 978 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 ZNF66Q6ZN08 573 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 MORC1Q86VD1 984 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 DDB2Q92466 427 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 PRR11Q96HE9 360 aaPredicted RBP6.44□□□□□ -1.38
SSB-209ENST00000470621 WDR24Q96S15 920 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 SLC52A1Q9NWF4 448 aa6.44□□□□□ -1.38
SSB-209ENST00000470621 H7C1Q1 480 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 TMEM225BP0DP42 221 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 CD19P15391 556 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 ST3GAL2Q16842 350 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 FBXO38Q6PIJ6 1188 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 USP17L6PQ6QN14 398 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 LINC01465Q8N7H1 131 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 PNLDC1Q8NA58 520 aaKnown RBP6.43□□□□□ -1.38
SSB-209ENST00000470621 IPO4Q8TEX9 1081 aaKnown RBP6.43□□□□□ -1.38
SSB-209ENST00000470621 PCGF6Q9BYE7 350 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 ZNF700Q9H0M5 742 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 TMEM8AQ9HCN3 771 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 SNX15Q9NRS6 342 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 CEP83Q9Y592 693 aa6.43□□□□□ -1.38
SSB-209ENST00000470621 CGB1A6NKQ9 187 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 TMPRSS11DO60235 418 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 CCNT2O60583 730 aaKnown RBP6.42□□□□□ -1.38
SSB-209ENST00000470621 PRAMEF2O60811 474 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 PRKCGP05129 697 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 FBLP22087 321 aaKnown RBP6.42□□□□□ -1.38
SSB-209ENST00000470621 SLC5A2P31639 672 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 PPM1AP35813 382 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 IL6STP40189 918 aaPredicted RBP6.42□□□□□ -1.38
SSB-209ENST00000470621 C21orf58P58505 322 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 ACOX1Q15067 660 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 RAB30Q15771 203 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 AASDHQ4L235 1098 aaPredicted RBP6.42□□□□□ -1.38
SSB-209ENST00000470621 DGKKQ5KSL6 1271 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 SYCE2Q6PIF2 218 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 SERPINA13PQ6UXR4 307 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 SEMA6DQ8NFY4 1073 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 MAFAQ8NHW3 353 aaPredicted RBP6.42□□□□□ -1.38
SSB-209ENST00000470621 STK33Q9BYT3 514 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 SAP30LQ9HAJ7 183 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 ADARB2Q9NS39 739 aaKnown RBP6.42□□□□□ -1.38
SSB-209ENST00000470621 TMOD4Q9NZQ9 345 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 FRMD4BQ9Y2L6 1034 aa6.42□□□□□ -1.38
SSB-209ENST00000470621 OR2W5A6NFC9 320 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms