RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SNCAIPQ9Y6H5 919 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 SCN7AQ01118 1682 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 ZNF831Q5JPB2 1677 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 E2F8A0AVK6 867 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 HTR3EA5X5Y0 456 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 TMEM150BA6NC51 233 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 LSM1O15116 133 aaKnown RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 RGL2O15211 777 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 DENRO43583 198 aaKnown RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 KLHL41O60662 606 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 CST8O60676 142 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 KLHL2O95198 593 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 SNRPAP09012 282 aaKnown RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 OCM2P0CE71 109 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 OCMP0CE72 109 aaPredicted RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 PSMC3P17980 439 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 SREBF1P36956 1147 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 IGBP1P78318 339 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 FLOT2Q14254 428 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 PSMD6Q15008 389 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 FAXCQ5TGI0 409 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 PDPK2PQ6A1A2 396 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 KRT80Q6KB66 452 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 MOXD1Q6UVY6 613 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 CLVS1Q8IUQ0 354 aaPredicted RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 ZFPM1Q8IX07 1006 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 CPNE9Q8IYJ1 553 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 PHTF2Q8N3S3 785 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 BRD8Q9H0E9 1235 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 TBC1D23Q9NUY8 699 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 TRNAU1APQ9NX07 287 aaKnown RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 SRP68Q9UHB9 627 aaKnown RBP9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 SERPINB13Q9UIV8 391 aa9.88□□□□□ -0.83
NHLRC3-203ENST00000470258 LOC102724428A0A0B4J2F2 783 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 CXorf49A8MYA2 514 aaPredicted RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 NUDT2P50583 147 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PRELPP51888 382 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 CDH15P55291 814 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PKNOX1P55347 436 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SIK1P57059 783 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 RHBDL3P58872 404 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 MRPS5P82675 430 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PTP4A2Q12974 167 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PDAP1Q13442 181 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 NFIXQ14938 502 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TFDP3Q5H9I0 405 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 C16orf87Q6PH81 154 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TMEM270Q6UE05 265 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 DNAJC14Q6Y2X3 702 aaPredicted RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 Q6ZNX1 250 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SV2AQ7L0J3 742 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ARMCX6Q7L4S7 300 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SLC26A11Q86WA9 606 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ERI1Q8IV48 349 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 NAT8LQ8N9F0 302 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ACTRT2Q8TDY3 377 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 RSPH1Q8WYR4 309 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 USP13Q92995 863 aaPredicted RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 CMTM5Q96DZ9 223 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 HAUS8Q9BT25 410 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 WDR18Q9BV38 432 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 NUF2Q9BZD4 464 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TBCCD1Q9NVR7 557 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 EFR3BQ9Y2G0 817 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 COQ6Q9Y2Z9 468 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 hCG_1818297A0A087WSY0 165 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 KLF11O14901 512 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 CBFA2T3O75081 653 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 FGFR3P22607 806 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 CCDC80Q76M96 950 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 MON1BQ7L1V2 547 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PTAR1Q7Z6K3 402 aaPredicted RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 KBTBD6Q86V97 674 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 CROCCP3Q8IVE0 287 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 UNC45BQ8IWX7 931 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 FEZF2Q8TBJ5 459 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 NLRP7Q8WX94 980 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 THAP11Q96EK4 314 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 KCNK16Q96T55 309 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SLX1AQ9BQ83 275 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 OSBPL6Q9BZF3 934 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SEMA6AQ9H2E6 1030 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ZNF696Q9H7X3 374 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PNPOQ9NVS9 261 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 RAB26Q9ULW5 256 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 RBMX2Q9Y388 322 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TRIM17Q9Y577 477 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PCDHB4Q9Y5E5 795 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 PCDHB2Q9Y5E7 798 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SOCS7O14512 581 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SPTLC1O15269 473 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 ITGAVP06756 1048 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 NFKBIAP25963 317 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 SERPINB5P36952 375 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 EIF2B2P49770 351 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 WASHC5Q12768 1159 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 TEX44Q53QW1 395 aa9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 FASTKD1Q53R41 847 aaKnown RBP9.87□□□□□ -0.83
NHLRC3-203ENST00000470258 OGFOD2Q6N063 350 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms