RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 CDKL3Q8IVW4 592 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 KAT2BQ92831 832 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 APBB2Q92870 758 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 UROC1Q96N76 676 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 KDM4CQ9H3R0 1056 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 KRT16P08779 473 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 YY1P25490 414 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 SLC6A3Q01959 620 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 GRAMD1BQ3KR37 738 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 CST9Q5W186 159 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 THEM5Q8N1Q8 247 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 ART4Q93070 314 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 CCT8L1PA6NM43 557 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 HNRNPCP07910 306 aaKnown RBP eCLIP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 RPL9P32969 192 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 MAGOHP61326 146 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 MAPRE1Q15691 268 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 SCYL2Q6P3W7 929 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 TFAP2BQ92481 460 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 MCRS1Q96EZ8 462 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 CALN1Q9BXU9 219 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 IPPQ9Y573 584 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 NUDT17P0C025 328 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 STIP1P31948 543 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 YWHAGP61981 247 aaKnown RBP eCLIP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 SLC44A4Q53GD3 710 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 IZUMO3Q5VZ72 239 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 ELMO3Q96BJ8 720 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 CCDC138Q96M89 665 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 GDAP2Q9NXN4 497 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 THP07101 528 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 VCPP55072 806 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 PDE1BQ01064 536 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 RAB44Q7Z6P3 723 aaPredicted RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 XYLT1Q86Y38 959 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 TGS1Q96RS0 853 aaKnown RBP7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 MAD1L1Q9Y6D9 718 aa7.26□□□□□ -1.25
GAPVD1-215ENST00000470056 FGFR4P22455 802 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ADORA2BP29275 332 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TM4SF4P48230 202 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 INPP1P49441 399 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ACOT1Q86TX2 421 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 MFN1Q8IWA4 741 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 IQCKQ8N0W5 287 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ANKRD52Q8NB46 1076 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 GLT1D1Q96MS3 346 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 GTF2IRD1Q9UHL9 959 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 C16orf96A6NNT2 1141 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ODC1P11926 461 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TRPM8Q7Z2W7 1104 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 RAET1EQ8TD07 263 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ZNF473Q8WTR7 871 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 RRN3Q9NYV6 651 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CDY2AQ9Y6F7 541 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 RASA4BC9J798 803 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 DPYSL4O14531 572 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CAPN9O14815 690 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TREHO43280 583 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 RASA4O43374 803 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CYBAP13498 195 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CDH8P55286 799 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ARL13BQ3SXY8 428 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TMEM192Q8IY95 271 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CEP70Q8NHQ1 597 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CCDC134Q9H6E4 229 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 PCDH9Q9HC56 1237 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 NGRNQ9NPE2 291 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 MAGEA13PA6NCF6 341 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ZSCAN5CA6NGD5 496 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TGM2P21980 687 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 SSTR3P32745 418 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 VHLP40337 213 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CDH6P55285 790 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 C2CD6Q53TS8 623 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TMEM63BQ5T3F8 832 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 C1orf146Q5VVC0 180 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 BBS12Q6ZW61 710 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 URGCPQ8TCY9 931 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ZNF483Q8TF39 744 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TEKT4Q8WW24 435 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ZBTB10Q96DT7 871 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 KCNK16Q96T55 309 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ELAC2Q9BQ52 826 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CACYBPQ9HB71 228 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 USP18Q9UMW8 372 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 AP4S1Q9Y587 144 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 APOL1O14791 398 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 LIN7AO14910 233 aaPredicted RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TSPY1Q01534 308 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 SP3Q02447 781 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CASC4Q6P4E1 433 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 ATP11CQ8NB49 1132 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 NXF3Q9H4D5 531 aaKnown RBP7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 TMBIM4Q9HC24 238 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 POLE3Q9NRF9 147 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 FAM49BQ9NUQ9 324 aa7.25□□□□□ -1.25
GAPVD1-215ENST00000470056 SHOC2Q9UQ13 582 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms