RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 C10orf76Q5T2E6 689 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 RSRC2Q7L4I2 434 aaKnown RBP13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC26A9Q7LBE3 791 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 TC2NQ8N9U0 490 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 CCDC42Q96M95 316 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 ZSWIM3Q96MP5 696 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 ISCUQ9H1K1 167 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 NMUR1Q9HB89 426 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 ADAMTS1Q9UHI8 967 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 MYH10P35580 1976 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
SPTLC1-204ENST00000469778 C2orf16Q68DN1 1984 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 CAPN9O14815 690 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 COCHO43405 550 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 SKILP12757 684 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 ADKP55263 362 aaKnown RBP13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 CYP4F8P98187 520 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 NNTQ13423 1086 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 TDGQ13569 410 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 HTR4Q13639 388 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC18A3Q16572 532 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 C10orf120Q5SQS8 335 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 E4F1Q66K89 784 aaPredicted RBP13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 OR6B2Q6IFH4 312 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 MSANTD2Q6P1R3 559 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 BHLHA9Q7RTU4 235 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 TMTC1Q8IUR5 882 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 UBALD2Q8IYN6 164 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 CCDC170Q8IYT3 715 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 ARL14EPQ8N8R7 260 aaPredicted RBP13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 ADAMTS19Q8TE59 1207 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 DCLK3Q9C098 648 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 KCNK12Q9HB15 430 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 TRPV5Q9NQA5 729 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 ARHGAP20Q9P2F6 1191 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 TBC1D14Q9P2M4 693 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 ZNF510Q9Y2H8 683 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 HBS1LQ9Y450 684 aaKnown RBP13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 EYSQ5T1H1 3165 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 PATJQ8NI35 1801 aa13.22□□□□□ -0.29
SPTLC1-204ENST00000469778 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 E2F8A0AVK6 867 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 DDX3XO00571 662 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 AKR1B10O60218 316 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 F9P00740 461 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 ERBB2P04626 1255 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC2A3P11169 496 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MBL2P11226 248 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 DESP17661 470 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 PSMC3P17980 439 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 GBP1P32455 592 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 NOS2P35228 1153 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MATKP42679 507 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 PFKPQ01813 784 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 RING1Q06587 406 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 GSE1Q14687 1217 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 ARHGAP29Q52LW3 1261 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 ACBD5Q5T8D3 534 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MMS22LQ6ZRQ5 1243 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 XYLT1Q86Y38 959 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 YAF2Q8IY57 180 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 OTUB2Q96DC9 234 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 SLC2A13Q96QE2 648 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 RNF38Q9H0F5 515 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MRPL47Q9HD33 250 aaKnown RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 PARVAQ9NVD7 372 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 STAP1Q9ULZ2 295 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.29
SPTLC1-204ENST00000469778 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 KRT3P12035 628 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 NCAM1P13591 858 aa13.2□□□□□ -0.3
SPTLC1-204ENST00000469778 FECHP22830 423 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms