RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 BEX3Q00994 111 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 NME3Q13232 169 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 LCLAT1Q6UWP7 414 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 RFX8Q6ZV50 586 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 MAP7D3Q8IWC1 876 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 CCDC185Q8N715 623 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 FNIP1Q8TF40 1166 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 DCAKDQ8WVC6 231 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 CYTH2Q99418 400 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 LGMNQ99538 433 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 FOXP3Q9BZS1 431 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 IQCGQ9H095 443 aaKnown RBP18.55■□□□□ 0.56
MCF2L-221ENST00000469415 PRKAG3Q9UGI9 489 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 NUMBLQ9Y6R0 609 aa18.55■□□□□ 0.56
MCF2L-221ENST00000469415 CFAP69A5D8W1 941 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 SPTLC1O15269 473 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 ATP2A2P16615 1042 aaKnown RBP18.54■□□□□ 0.56
MCF2L-221ENST00000469415 CYP2F1P24903 491 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 HOXA11P31270 313 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-221ENST00000469415 HDAC4P56524 1084 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 ZBTB16Q05516 673 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 SLC10A2Q12908 348 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-221ENST00000469415 TAF1BQ53T94 588 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-221ENST00000469415 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 CDHR3Q6ZTQ4 885 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 DENND5BQ6ZUT9 1274 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 TP53INP2Q8IXH6 220 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 TMEM40Q8WWA1 233 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 GBA2Q9HCG7 927 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-221ENST00000469415 FBXO6Q9NRD1 293 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-221ENST00000469415 TFDP2Q14188 446 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 PDK4Q16654 411 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 CEP128Q6ZU80 1094 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 CCNYQ8ND76 341 aa18.54■□□□□ 0.56
MCF2L-221ENST00000469415 CCDC78A2IDD5 438 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 A6NJR5 290 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 MGRN1O60291 552 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 EDF1O60869 148 aaKnown RBP18.53■□□□□ 0.56
MCF2L-221ENST00000469415 CPA2P48052 419 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 NDUFV1P49821 464 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 SESN2P58004 480 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-221ENST00000469415 OLFML1Q6UWY5 402 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 RIBC1Q8N443 379 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-221ENST00000469415 ATXN7L3BQ96GX2 97 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 CYP3A43Q9HB55 503 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 USP29Q9HBJ7 922 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 ITGA11Q9UKX5 1188 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 SMG5Q9UPR3 1016 aaKnown RBP18.53■□□□□ 0.56
MCF2L-221ENST00000469415 TRIP11Q15643 1979 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 CYP2C9P11712 490 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 GOT1P17174 413 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 PSEN1P49768 467 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 GTF2A2P52657 109 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 SLC6A3Q01959 620 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 NR1H3Q13133 447 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 NME8Q8N427 588 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 ZFP42Q96MM3 310 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 SLC24A2Q9UI40 661 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 CPA4Q9UI42 421 aa18.53■□□□□ 0.56
MCF2L-221ENST00000469415 RARBP10826 455 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 ATICP31939 592 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 KLHL38Q2WGJ6 581 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 DCAF6Q58WW2 860 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 KCNT2Q6UVM3 1135 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 ZCCHC23Q6ZST2 131 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 NLRP9Q7RTR0 991 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 KHSRPQ92945 711 aaKnown RBP eCLIP18.52■□□□□ 0.56
MCF2L-221ENST00000469415 AGAP3Q96P47 875 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 ARMCX1Q9P291 453 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 YWHAZP63104 245 aaKnown RBP18.52■□□□□ 0.56
MCF2L-221ENST00000469415 GALNTL6Q49A17 601 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 ARMC2Q8NEN0 867 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 MANSC1Q9H8J5 431 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 PCMTD2Q9NV79 361 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 ACTL7BQ9Y614 415 aa18.52■□□□□ 0.56
MCF2L-221ENST00000469415 MEIS3P2A8K0S8 358 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 EPHB2P29323 1055 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 PTPN7P35236 360 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 GNL1P36915 607 aaPredicted RBP18.52■□□□□ 0.55
MCF2L-221ENST00000469415 CCNA1P78396 465 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 ZNF792Q3KQV3 632 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 ADGRD1Q6QNK2 874 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 SMYD2Q9NRG4 433 aa18.52■□□□□ 0.55
MCF2L-221ENST00000469415 USP12O75317 370 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 MMP3P08254 477 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 GSTA1P08263 222 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 EZRP15311 586 aaKnown RBP18.51■□□□□ 0.55
MCF2L-221ENST00000469415 ALDH3A1P30838 453 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 ABCG1P45844 678 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 NUMBP49757 651 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 HIC1Q14526 733 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 PPP2R5DQ14738 602 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 PAN2Q504Q3 1202 aaKnown RBP18.51■□□□□ 0.55
MCF2L-221ENST00000469415 RNF169Q8NCN4 708 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 TBCBQ99426 244 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 AP4E1Q9UPM8 1137 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 USH1CQ9Y6N9 552 aa18.51■□□□□ 0.55
MCF2L-221ENST00000469415 PRPF4O43172 522 aaKnown RBP eCLIP18.51■□□□□ 0.551e-6■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms