RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 HNRNPDLO14979 420 aaKnown RBP13.45□□□□□ -0.26
HDAC6-217ENST00000469223 OGTO15294 1046 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 KLK10O43240 276 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 PAPSS1O43252 624 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-217ENST00000469223 CDKL5O76039 1030 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 OAS1P00973 400 aaKnown RBP13.45□□□□□ -0.26
HDAC6-217ENST00000469223 ADRB2P07550 413 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 C1SP09871 688 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 CDK4P11802 303 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 MUTP22033 750 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 CTSKP43235 329 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 RAD51AP2Q09MP3 1159 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 KYAT1Q16773 422 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 FAM124AQ86V42 546 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 TMEM25Q86YD3 366 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 BBS7Q8IWZ6 715 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
HDAC6-217ENST00000469223 TSC1Q92574 1164 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 HIC2Q96JB3 615 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 TRIM9Q9C026 710 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 ITM2CQ9NQX7 267 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 SPHK2Q9NRA0 654 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 L1RE1Q9UN81 338 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 POLQO75417 2590 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 E9PMD0 336 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 MYF5P13349 255 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 OXTRP30559 389 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 LIG4P49917 911 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 MYL7Q01449 175 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 OSTM1Q86WC4 334 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 SNRNP27Q8WVK2 155 aaKnown RBP13.44□□□□□ -0.26
HDAC6-217ENST00000469223 OTUB2Q96DC9 234 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 FUBP3Q96I24 572 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC6-217ENST00000469223 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-217ENST00000469223 ZNF560Q96MR9 790 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 ACBD6Q9BR61 282 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 MSTO1Q9BUK6 570 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 C6orf106Q9H6K1 298 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-217ENST00000469223 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 CLCA2Q9UQC9 943 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 DERAQ9Y315 318 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 PCDHB1Q9Y5F3 818 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 CRYBG3Q68DQ2 2970 aa13.44□□□□□ -0.26
HDAC6-217ENST00000469223 NEDD8-MDP1E9PL57 170 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 TRAK2O60296 914 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 OR52Z1P0C646 297 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 MAGEA11P43364 429 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 FOSBP53539 338 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 KDM7AQ6ZMT4 941 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 ATG14Q6ZNE5 492 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 ADAT2Q7Z6V5 191 aaKnown RBP13.43□□□□□ -0.26
HDAC6-217ENST00000469223 CD302Q8IX05 232 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 SIPA1Q96FS4 1042 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 TTLL2Q9BWV7 592 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
HDAC6-217ENST00000469223 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-217ENST00000469223 SH3BP1Q9Y3L3 701 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 STON1Q9Y6Q2 735 aa13.43□□□□□ -0.26
HDAC6-217ENST00000469223 SETD2Q9BYW2 2564 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-217ENST00000469223 KIF26BQ2KJY2 2108 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 A0A1B0GTQ1 180 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 GFRA2O00451 464 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 CACNG3O60359 315 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 IGLV3-19P01714 112 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 IRF1P10914 325 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 ABCB4P21439 1286 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 ORC1Q13415 861 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 UBAP2LQ14157 1087 aaKnown RBP13.42□□□□□ -0.26
HDAC6-217ENST00000469223 C4orf17Q53FE4 359 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 PRAMEF14Q5SWL7 426 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 RINT1Q6NUQ1 792 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 TMPRSS6Q8IU80 811 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 EID2Q8N6I1 236 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 DCBLD1Q8N8Z6 715 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 SNX29Q8TEQ0 813 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 PRCCQ92733 491 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-217ENST00000469223 WBP2Q969T9 261 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 ZNF578Q96N58 590 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-217ENST00000469223 NUP58Q9BVL2 599 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
HDAC6-217ENST00000469223 CACNA1DQ01668 2161 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 ENO4A6NNW6 628 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 PFKFB2O60825 505 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 MPOP05164 745 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 ACADMP11310 421 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 PLS3P13797 630 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 ANXA13P27216 316 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 SMTNP53814 917 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 PSMC1P62191 440 aaKnown RBP13.41□□□□□ -0.26
HDAC6-217ENST00000469223 GABREP78334 506 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 INSM1Q01101 510 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-217ENST00000469223 IFRD2Q12894 506 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-217ENST00000469223 TAF10Q12962 218 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 C1orf186Q6ZWK4 172 aa13.41□□□□□ -0.26
HDAC6-217ENST00000469223 DIS3L2Q8IYB7 885 aaKnown RBP13.41□□□□□ -0.26
HDAC6-217ENST00000469223 EXD3Q8N9H8 876 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms