RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GABRQQ9UN88 632 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 MYH7BA7E2Y1 1941 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 TMEM88BA6NKF7 163 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 O00370 1275 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 HAT1O14929 419 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 SNPHO15079 494 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 EPHB6O15197 1021 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 CLDN3O15551 220 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 RAD51CO43502 376 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 ATP5HO75947 161 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 JAK3P52333 1124 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 THOP1P52888 689 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 PRKCZQ05513 592 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 KLHL30Q0D2K2 578 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 CETN1Q12798 172 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 PHKG1Q16816 387 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 TIGD2Q4W5G0 525 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 PEX26Q7Z412 305 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 BBOF1Q8ND07 529 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 SLC5A5Q92911 643 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 HSD17B14Q9BPX1 270 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 C7orf25Q9BPX7 421 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 THAP9Q9H5L6 903 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 LRRC4CQ9HCJ2 640 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 THAP1Q9NVV9 213 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 DNAJC16Q9Y2G8 782 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 UNC80Q8N2C7 3258 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 MYH6P13533 1939 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 DDX60LQ5H9U9 1706 aaKnown RBP10.31□□□□□ -0.76
NUP50-214ENST00000469163 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 GABBR2O75899 941 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 PSMG1O95456 288 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 FUCA1P04066 466 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 POLD2P49005 469 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 CDR2Q01850 454 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ACVR2BQ13705 512 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ZNF568Q3ZCX4 644 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 TTC23LQ6PF05 361 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 TMC5Q6UXY8 1006 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 RASSF3Q86WH2 238 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 HASPINQ8TF76 798 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 BSNDQ8WZ55 320 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 HPS1Q92902 700 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 DNAJC19Q96DA6 116 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 LRRC37BQ96QE4 947 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 RIT2Q99578 217 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 SHCBP1LQ9BZQ2 653 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 SPC25Q9HBM1 224 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 NEK6Q9HC98 313 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 KCNK9Q9NPC2 374 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 RRN3Q9NYV6 651 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ZNF112Q9UJU3 913 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 PFASO15067 1338 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 EMSYQ7Z589 1322 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 LRRC53A6NM62 1247 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ANKRD63C9JTQ0 380 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 SLC25A27O95847 323 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 CENPAP49450 140 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 TRPC3Q13507 836 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 GNA13Q14344 377 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 CCDC58Q4VC31 144 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 DCAF6Q58WW2 860 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ACSBG2Q5FVE4 666 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 DGLUCYQ7Z3D6 616 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 TAB3Q8N5C8 712 aaPredicted RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 MB21D1Q8N884 522 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 DNAJB3Q8WWF6 145 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 PSPC1Q8WXF1 523 aaKnown RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 HDAC2Q92769 488 aaKnown RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 ECSITQ9BQ95 431 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 HAUS8Q9BT25 410 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 TRIM31Q9BZY9 425 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 SACM1LQ9NTJ5 587 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 DNAJC17Q9NVM6 304 aaKnown RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 GMIPQ9P107 970 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 CRNNQ9UBG3 495 aaPredicted RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 MAFFQ9ULX9 164 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ARAP2Q8WZ64 1704 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 SYNJ2BP-COX16A0A087WUM0 186 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ABCB1P08183 1280 aaPredicted RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 CYP3A4P08684 503 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 SUPT20HL2P0C7V6 817 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ZBTB41Q5SVQ8 909 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 IL23RQ5VWK5 629 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 C4orf50Q6ZRC1 276 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 APPL2Q8NEU8 664 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 MRPL1Q9BYD6 325 aaKnown RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 ATP13A3Q9H7F0 1226 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 LIN28AQ9H9Z2 209 aaKnown RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 PCDH12Q9NPG4 1184 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 COX16Q9P0S2 106 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 UVRAGQ9P2Y5 699 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 PACSIN2Q9UNF0 486 aaPredicted RBP10.3□□□□□ -0.76
NUP50-214ENST00000469163 SCINQ9Y6U3 715 aa10.3□□□□□ -0.76
NUP50-214ENST00000469163 PABPN1LA6NDY0 278 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms