RNA–Protein interactions for RNA: ENST00000468532.5

CHKB-205, Transcript of choline kinase beta, human

TSL 5

Gene CHKB, Length 1,052 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-205	ENST00000468532	PKN3	Q6P5Z2	889 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	KLHDC10	Q6PID8	442 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	RHBDF2	Q6PJF5	856 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	LCLAT1	Q6UWP7	414 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	TADA2B	Q86TJ2	420 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	ZBTB44	Q8NCP5	570 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	ULBP1	Q9BZM6	244 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	UBE2T	Q9NPD8	197 aa	Predicted RBP	32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	C2orf42	Q9NWW7	574 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	DNMT3L	Q9UJW3	386 aa		32.7	■■■□□ 2.83
CHKB-205	ENST00000468532	CALCA	P01258	141 aa		32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	LMNA	P02545	664 aa	Known RBP	32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	PLA2G4A	P47712	749 aa		32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	ZNF132	P52740	706 aa		32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	FAM114A1	Q8IWE2	563 aa		32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	ARHGAP18	Q8N392	663 aa		32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	EZH1	Q92800	747 aa	Predicted RBP	32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	ZSWIM1	Q9BR11	485 aa		32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	32.69	■■■□□ 2.82
CHKB-205	ENST00000468532	PAPSS2	O95340	614 aa	Predicted RBP	32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	ZBED1	O96006	694 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	ADH5	P11766	374 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	KRT5	P13647	590 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	NRL	P54845	237 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	YWHAG	P61981	247 aa	Known RBP eCLIP	32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	ADIG	Q0VDE8	80 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	FBXO43	Q4G163	708 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	PKDCC	Q504Y2	493 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	LY6G5C	Q5SRR4	150 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	TRIM65	Q6PJ69	517 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	GBP6	Q6ZN66	633 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	ZNF276	Q8N554	614 aa		32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	CDK5RAP1	Q96SZ6	601 aa	Known RBP	32.68	■■■□□ 2.82
CHKB-205	ENST00000468532	LSM7	Q9UK45	103 aa	Known RBP	32.68	■■■□□ 2.82
CHKB-205	ENST00000468532		M0QYV0	167 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	SLC9A1	P19634	815 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	STIL	Q15468	1287 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	CNGA2	Q16280	664 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	PM20D1	Q6GTS8	502 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	HTR3D	Q70Z44	454 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	MIB1	Q86YT6	1006 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	RASAL2	Q9UJF2	1139 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532	KIAA1549L	Q6ZVL6	1849 aa		32.67	■■■□□ 2.82
CHKB-205	ENST00000468532		K7ESF4	209 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	GREM1	O60565	184 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	ATG13	O75143	517 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	MAN2A1	Q16706	1144 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	HSP90AA4P	Q58FG1	418 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	GJB7	Q6PEY0	223 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	SIX6OS1	Q8N1H7	587 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	KCTD13	Q8WZ19	329 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	NDRG1	Q92597	394 aa	Known RBP	32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	SECISBP2L	Q93073	1101 aa	Known RBP	32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	CNTN6	Q9UQ52	1028 aa		32.66	■■■□□ 2.82
CHKB-205	ENST00000468532	EP300	Q09472	2414 aa	Predicted RBP	32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	LILRB5	O75023	590 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	SLC6A11	P48066	632 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	GAD2	Q05329	585 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	EFEMP1	Q12805	493 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	EXOC3L4	Q17RC7	722 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	RSRC2	Q7L4I2	434 aa	Known RBP	32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	ENOSF1	Q7L5Y1	443 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	C12orf40	Q86WS4	652 aa		32.65	■■■□□ 2.82
CHKB-205	ENST00000468532	GTPBP10	A4D1E9	387 aa	Known RBP	32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	CHURC1-FNTB	B4DL54	471 aa		32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	RGS7	P49802	495 aa		32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	MFAP3	P55082	362 aa		32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	BHLHA9	Q7RTU4	235 aa		32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	RPLP0P6	Q8NHW5	317 aa		32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	SPHK2	Q9NRA0	654 aa		32.64	■■■□□ 2.82
CHKB-205	ENST00000468532	LCP1	P13796	627 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	EIF2D	P41214	584 aa	Known RBP	32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	APBA1	Q02410	837 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	DMWD	Q09019	674 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	CT47A1	Q5JQC4	288 aa	Predicted RBP	32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	BTBD8	Q5XKL5	378 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	SLC35F5	Q8WV83	523 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	FAM81B	Q96LP2	452 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	APEX2	Q9UBZ4	518 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	GPR179	Q6PRD1	2367 aa		32.63	■■■□□ 2.81
CHKB-205	ENST00000468532	GVINP1	Q7Z2Y8	2422 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	STC2	O76061	302 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	PRKCSH	P14314	528 aa	Predicted RBP	32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	HOXC13	P31276	330 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	FNTB	P49356	437 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	ARHGAP44	Q17R89	818 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	ANO4	Q32M45	955 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	HEATR6	Q6AI08	1181 aa	Known RBP	32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	PMF1	Q6P1K2	205 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	RBM43	Q6ZSC3	357 aa	Known RBP	32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	TMEM25	Q86YD3	366 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	PNKP	Q96T60	521 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	TUBGCP2	Q9BSJ2	902 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	CNGB3	Q9NQW8	809 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	SLC8A2	Q9UPR5	921 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	OTOGL	Q3ZCN5	2332 aa		32.62	■■■□□ 2.81
CHKB-205	ENST00000468532	HOXC11	O43248	304 aa	Predicted RBP	32.61	■■■□□ 2.81
CHKB-205	ENST00000468532	PON1	P27169	355 aa		32.61	■■■□□ 2.81
CHKB-205	ENST00000468532	SEC13	P55735	322 aa		32.61	■■■□□ 2.81
CHKB-205	ENST00000468532	COG7	P83436	770 aa		32.61	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms