RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GREM1O60565 184 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 PAEPP09466 180 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 RALAP11233 206 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 ADH5P11766 374 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 HOXC13P31276 330 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 PLA2G4AP47712 749 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 SLC6A11P48066 632 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 BCAT1P54687 386 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 PDE4CQ08493 712 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 LY6G5CQ5SRR4 150 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 TMEM270Q6UE05 265 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 TADA2BQ86TJ2 420 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 LONP2Q86WA8 852 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 CCDC26Q8TAB7 109 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 RUBCNQ92622 972 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 KAT5Q92993 513 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 CDK5RAP1Q96SZ6 601 aaKnown RBP17.98■□□□□ 0.47
SSBP1-207ENST00000468267 HESX1Q9UBX0 185 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 NUDT5Q9UKK9 219 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 SLC8A2Q9UPR5 921 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 DCHS1Q96JQ0 3298 aa17.98■□□□□ 0.47
SSBP1-207ENST00000468267 K7EQS6 105 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 RNF225M0QZC1 329 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-207ENST00000468267 TULP2O00295 520 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 O00370 1275 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 MDM4O15151 490 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 EIF2DP41214 584 aaKnown RBP17.97■□□□□ 0.47
SSBP1-207ENST00000468267 TKTL1P51854 596 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 GCNT1Q02742 428 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 GOLGA8FQ08AF8 430 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 GOLGA8DPQ0D2H9 430 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 BST2Q10589 180 aaKnown RBP17.97■□□□□ 0.47
SSBP1-207ENST00000468267 HEATR6Q6AI08 1181 aaKnown RBP17.97■□□□□ 0.47
SSBP1-207ENST00000468267 PM20D1Q6GTS8 502 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 LCLAT1Q6UWP7 414 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 RRAGAQ7L523 313 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 ARHGEF19Q8IW93 802 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 ARHGAP18Q8N392 663 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 RPLP0P6Q8NHW5 317 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 UBA3Q8TBC4 463 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 TFAP2BQ92481 460 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 PNKPQ96T60 521 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 INTS2Q9H0H0 1204 aaKnown RBP17.97■□□□□ 0.47
SSBP1-207ENST00000468267 SPHK2Q9NRA0 654 aa17.97■□□□□ 0.47
SSBP1-207ENST00000468267 SMG5Q9UPR3 1016 aaKnown RBP17.97■□□□□ 0.47
SSBP1-207ENST00000468267 A0A0A0MRY4 1105 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 HRO43593 1189 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 ZBED1O96006 694 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 CNR2P34972 360 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 GAD2Q05329 585 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 PKDCCQ504Y2 493 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 SYT13Q7L8C5 426 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 WDR5BQ86VZ2 330 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 C12orf40Q86WS4 652 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 TMEM25Q86YD3 366 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 IRF2BP1Q8IU81 584 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 CNOT6LQ96LI5 555 aaKnown RBP17.96■□□□□ 0.47
SSBP1-207ENST00000468267 KREMEN1Q96MU8 473 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 LMBRD1Q9NUN5 540 aa17.96■□□□□ 0.47
SSBP1-207ENST00000468267 POLR3BQ9NW08 1133 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-207ENST00000468267 LSM7Q9UK45 103 aaKnown RBP17.96■□□□□ 0.47
SSBP1-207ENST00000468267 EML5Q05BV3 1969 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 RALGAPA1Q6GYQ0 2036 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 HOXC11O43248 304 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-207ENST00000468267 SETSIPP0DME0 302 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 ZNF132P52740 706 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 YWHAGP61981 247 aaKnown RBP eCLIP17.95■□□□□ 0.46
SSBP1-207ENST00000468267 MESP2Q0VG99 397 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 CNGA2Q16280 664 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 DCLK2Q8N568 766 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 CAMKK1Q8N5S9 505 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 RBBP8NLQ8NC74 664 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-207ENST00000468267 USP33Q8TEY7 942 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 KCTD13Q8WZ19 329 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 ACDQ96AP0 544 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 HINFPQ9BQA5 517 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 ZSWIM1Q9BR11 485 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 ULBP1Q9BZM6 244 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 NUP62CLQ9H1M0 184 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 LRRC4Q9HBW1 653 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 CNTN6Q9UQ52 1028 aa17.95■□□□□ 0.46
SSBP1-207ENST00000468267 CCDC163A0A0D9SF12 145 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.94■□□□□ 0.46
SSBP1-207ENST00000468267 STC2O76061 302 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 KAT7O95251 611 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 APODP05090 189 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 GRIA2P42262 883 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 SEC13P55735 322 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 COG7P83436 770 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 STILQ15468 1287 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 BTBD8Q5XKL5 378 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 Q6ZNB5 142 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 BHLHA9Q7RTU4 235 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 MIB1Q86YT6 1006 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 CREBRFQ8IUR6 639 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 SFTPA1Q8IWL2 248 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 ETFBKMTQ8IXQ9 262 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 PHTF2Q8N3S3 785 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 SLC35F5Q8WV83 523 aa17.94■□□□□ 0.46
SSBP1-207ENST00000468267 NDRG1Q92597 394 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms