RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CFAP97Q9P2B7 532 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 PCDHA12Q9UN75 941 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 CPQQ9Y646 472 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 MED13Q9UHV7 2174 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 F8P00451 2351 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 WASH3PC4AMC7 463 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 M0R2N6 131 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 TRIM24O15164 1050 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
VPS26A-204ENST00000467852 CYP11B2P19099 503 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 CD27P26842 260 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 ZNF132P52740 706 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 SKOR1P84550 965 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 NOLC1Q14978 699 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS26A-204ENST00000467852 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 PTRH1Q86Y79 214 aaKnown RBP12.48□□□□□ -0.41
VPS26A-204ENST00000467852 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
VPS26A-204ENST00000467852 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
VPS26A-204ENST00000467852 SCN1AP35498 2009 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 CYB561D2O14569 222 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 PPEF2O14830 753 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 VILLO15195 856 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 TRAK2O60296 914 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 SYNCRIPO60506 623 aaKnown RBP12.47□□□□□ -0.41
VPS26A-204ENST00000467852 NUDT7P0C024 238 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 CXCL8P10145 99 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 PROZP22891 400 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 CYP2F1P24903 491 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 ARRB1P49407 418 aaPredicted RBP12.47□□□□□ -0.41
VPS26A-204ENST00000467852 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
VPS26A-204ENST00000467852 CLN3Q13286 438 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 SEZ6Q53EL9 994 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 TICAM1Q8IUC6 712 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 SLC46A1Q96NT5 459 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 XPO6Q96QU8 1125 aaKnown RBP12.47□□□□□ -0.41
VPS26A-204ENST00000467852 RNF38Q9H0F5 515 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 ABCB6Q9NP58 842 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 SPHK2Q9NRA0 654 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 TMLHEQ9NVH6 421 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
VPS26A-204ENST00000467852 STON1Q9Y6Q2 735 aa12.47□□□□□ -0.41
VPS26A-204ENST00000467852 LRRK1Q38SD2 2015 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 CCDC169A6NNP5 214 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 ABLIM1O14639 778 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 CSO75390 466 aaKnown RBP12.46□□□□□ -0.41
VPS26A-204ENST00000467852 FSBPO95073 299 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 RACK1P63244 317 aaKnown RBP12.46□□□□□ -0.41
VPS26A-204ENST00000467852 PPP2R3AQ06190 1150 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 CDCP2Q5VXM1 449 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 GALNT17Q6IS24 598 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
VPS26A-204ENST00000467852 LEO1Q8WVC0 666 aaPredicted RBP12.46□□□□□ -0.41
VPS26A-204ENST00000467852 KIFAP3Q92845 792 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 BIRC7Q96CA5 298 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 ZBTB45Q96K62 511 aaPredicted RBP12.46□□□□□ -0.41
VPS26A-204ENST00000467852 PCNX1Q96RV3 2341 aa12.46□□□□□ -0.41
VPS26A-204ENST00000467852 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 PRRT4C9JH25 899 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 EFSO43281 561 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 AGFG2O95081 481 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 ABL1P00519 1130 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 MBL2P11226 248 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-204ENST00000467852 EPHA8P29322 1005 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-204ENST00000467852 CASRP41180 1078 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 BCAT1P54687 386 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 MYL7Q01449 175 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 SHBQ15464 509 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 C3orf38Q5JPI3 329 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 WSCD1Q658N2 575 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 SCN4BQ8IWT1 228 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 SRRM1Q8IYB3 904 aaKnown RBP12.45□□□□□ -0.42
VPS26A-204ENST00000467852 TSPAN18Q96SJ8 248 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
VPS26A-204ENST00000467852 POLD4Q9HCU8 107 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
VPS26A-204ENST00000467852 SATB2Q9UPW6 733 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
VPS26A-204ENST00000467852 VPS37CA5D8V6 355 aaPredicted RBP12.44□□□□□ -0.42
VPS26A-204ENST00000467852 NPC1O15118 1278 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 TSPAN3O60637 253 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 CLTAP09496 248 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 ACSL1P33121 698 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 MATR3P43243 847 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS26A-204ENST00000467852 PPP3CCP48454 512 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 DUSP3P51452 185 aaPredicted RBP12.44□□□□□ -0.42
VPS26A-204ENST00000467852 DAB2P98082 770 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 TBR1Q16650 682 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 SPATA1Q5VX52 437 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 C9orf57Q5W0N0 161 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 ZNF787Q6DD87 383 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 KANSL1Q7Z3B3 1105 aa12.44□□□□□ -0.42
VPS26A-204ENST00000467852 ATCAYQ86WG3 371 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms