RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PGFP49763 221 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 IRX4P78413 519 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 DNM1Q05193 864 aaKnown RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 BYSLQ13895 437 aaKnown RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 C10orf76Q5T2E6 689 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 SH3PXD2AQ5TCZ1 1133 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 NUDT18Q6ZVK8 323 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 TRMT11Q7Z4G4 463 aaKnown RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 UNC93AQ86WB7 457 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 TMEFF1Q8IYR6 380 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 CRYBG2Q8N1P7 616 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 FRMD1Q8N878 549 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 ZNF513Q8N8E2 541 aaPredicted RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 C12orf29Q8N999 325 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 TMC2Q8TDI7 906 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 KCNV2Q8TDN2 545 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 WBP2Q969T9 261 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 CSNK1G1Q9HCP0 422 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 TLR8Q9NR97 1041 aaKnown RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 MBD1Q9UIS9 605 aaPredicted RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 FRMD4BQ9Y2L6 1034 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 PDXKO00764 312 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 CDX4O14627 284 aaPredicted RBP18.24■□□□□ 0.51
TRIM56-203ENST00000467847 ASS1P00966 412 aaKnown RBP18.24■□□□□ 0.51
TRIM56-203ENST00000467847 FAM200BP0CF97 657 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 ADORA2BP29275 332 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 PTGER3P43115 390 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 ZNF252P-AS1Q0IIN9 211 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 PKP1Q13835 747 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 MAP7D1Q3KQU3 841 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 TRIM61Q5EBN2 209 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 CEP135Q66GS9 1140 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 SPOPLQ6IQ16 392 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 SV2AQ7L0J3 742 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 TERB1Q8NA31 727 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 JAKMIP2Q96AA8 810 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRIM56-203ENST00000467847 EVLQ9UI08 416 aaPredicted RBP18.24■□□□□ 0.51
TRIM56-203ENST00000467847 RCOR1Q9UKL0 485 aa18.24■□□□□ 0.51
TRIM56-203ENST00000467847 ANKRD11Q6UB99 2663 aaPredicted RBP18.23■□□□□ 0.51
TRIM56-203ENST00000467847 NEDD8-MDP1E9PL57 170 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 IKBKBO14920 756 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 TBX18O95935 607 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 HOXB3P14651 431 aaPredicted RBP18.23■□□□□ 0.51
TRIM56-203ENST00000467847 GOLGA8FQ08AF8 430 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 GOLGA8DPQ0D2H9 430 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 LMAN2Q12907 356 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 UAP1L1Q3KQV9 507 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 LYSMD4Q5XG99 296 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 GRAMD4Q6IC98 578 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 HTR3DQ70Z44 454 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 SYT12Q8IV01 421 aa18.23■□□□□ 0.51
TRIM56-203ENST00000467847 KLF16Q9BXK1 252 aaPredicted RBP18.23■□□□□ 0.51
TRIM56-203ENST00000467847 NUSAP1Q9BXS6 441 aaKnown RBP18.23■□□□□ 0.51
TRIM56-203ENST00000467847 DNAJC17Q9NVM6 304 aaKnown RBP18.23■□□□□ 0.51
TRIM56-203ENST00000467847 TRIM24O15164 1050 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 CYP26A1O43174 497 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 CALUO43852 315 aaPredicted RBP18.22■□□□□ 0.51
TRIM56-203ENST00000467847 HLA-DRAP01903 254 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 HOXB2P14652 356 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 PFKFB1P16118 471 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 ATP5C1P36542 298 aaKnown RBP18.22■□□□□ 0.51
TRIM56-203ENST00000467847 DPP6P42658 865 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 WASP42768 502 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 FOXC1Q12948 553 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 SPDYCQ5MJ68 293 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 GPRIN1Q7Z2K8 1008 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 BBS2Q9BXC9 721 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 IMPG2Q9BZV3 1241 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 CYLDQ9NQC7 956 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 TMEM74BQ9NUR3 256 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 LSM7Q9UK45 103 aaKnown RBP18.22■□□□□ 0.51
TRIM56-203ENST00000467847 SCML2Q9UQR0 700 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 ZZEF1O43149 2961 aa18.22■□□□□ 0.51
TRIM56-203ENST00000467847 ATXN2Q99700 1313 aaKnown RBP18.22■□□□□ 0.51
TRIM56-203ENST00000467847 A0A1B0GVL5 298 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 AP5Z1O43299 807 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 GREM1O60565 184 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 MYL1P05976 194 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 CEACAM1P13688 526 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 TYRP14679 529 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 GABRG2P18507 467 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 CSRP1P21291 193 aaKnown RBP18.21■□□□□ 0.51
TRIM56-203ENST00000467847 ITPKAP23677 461 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 NTSR1P30989 418 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 MAPK8P45983 427 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 VAMP7P51809 220 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 RPL6Q02878 288 aaKnown RBP18.21■□□□□ 0.51
TRIM56-203ENST00000467847 INCA1Q0VD86 236 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 C1orf220Q5T0J3 134 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 SDE2Q6IQ49 451 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 TPGS1Q6ZTW0 290 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 CLEC20AQ6ZU45 233 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 MIB1Q86YT6 1006 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 SPRYD3Q8NCJ5 442 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 XPO6Q96QU8 1125 aaKnown RBP18.21■□□□□ 0.51
TRIM56-203ENST00000467847 TWNKQ96RR1 684 aa18.21■□□□□ 0.51
TRIM56-203ENST00000467847 HNRNPABQ99729 332 aaKnown RBP18.21■□□□□ 0.51
TRIM56-203ENST00000467847 OSER1Q9NX31 292 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms