RNA–Protein interactions for RNA: ENST00000467792.1

PSMD1-208, Transcript of proteasome 26S subunit, non-ATPase 1, human

TSL 2

Gene PSMD1, Length 444 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD1-208	ENST00000467792	NRAP	Q86VF7	1730 aa		4.55	□□□□□ -1.68
PSMD1-208	ENST00000467792	CPD	O75976	1380 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	CEMIP	Q8WUJ3	1361 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	ITGB4	P16144	1822 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	GOLGA6L3	A6NEY3	463 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	LRRC14B	A6NHZ5	514 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	FAM171A2	A8MVW0	826 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	HNRNPDL	O14979	420 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	BAIAP3	O94812	1187 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	FXR1	P51114	621 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	INHBE	P58166	350 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	NUCB1	Q02818	461 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	CALD1	Q05682	793 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	PRKG1	Q13976	671 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	DAG1	Q14118	895 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	SMN1	Q16637	294 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	TWISTNB	Q3B726	338 aa	Predicted RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	ALDH1L2	Q3SY69	923 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	ZKSCAN2	Q63HK3	967 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	APOA5	Q6Q788	366 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	C1orf122	Q6ZSJ8	110 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	SUGP1	Q8IWZ8	645 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	TMEM57	Q8N5G2	664 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	TBC1D15	Q8TC07	691 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	CASKIN2	Q8WXE0	1202 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	ANKS1A	Q92625	1134 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	RGMA	Q96B86	450 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	ZG16B	Q96DA0	208 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	MSLNL	Q96KJ4	702 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	DMRTA2	Q96SC8	542 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	EIF2A	Q9BY44	585 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	C22orf23	Q9BZE7	217 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	PRDM13	Q9H4Q3	707 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	SYNPO2L	Q9H987	977 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	CYP4F11	Q9HBI6	524 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	OGDHL	Q9ULD0	1010 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	CORO2B	Q9UQ03	480 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	PCDHB1	Q9Y5F3	818 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	COL14A1	Q05707	1796 aa	Known RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	COL5A2	P05997	1499 aa	Predicted RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	KDM6A	O15550	1401 aa	Predicted RBP	4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	PAPPA	Q13219	1627 aa		4.54	□□□□□ -1.68
PSMD1-208	ENST00000467792	LAMB4	A4D0S4	1761 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	UBR2	Q8IWV8	1755 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792		A0A1W2PPL8	197 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	GAGE12B	A1L429	117 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	GAGE12H	A6NDE8	117 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	POM121B	A6NF01	834 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	DIRC3	C9JPN6	131 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	GRM6	O15303	877 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	KCNQ3	O43525	872 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	HTATSF1	O43719	755 aa	Known RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SGTA	O43765	313 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	ORC4	O43929	436 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	CDKL5	O76039	1030 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	DDX58	O95786	925 aa	Known RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	FTL	P02792	175 aa	Predicted RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SPATA31D3	P0C874	917 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	FCER1A	P12319	257 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	GCSH	P23434	173 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	ELF1	P32519	619 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	BMPR1A	P36894	532 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	CLNS1A	P54105	237 aa	Known RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	RAB1A	P62820	205 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	CXADR	P78310	365 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	GRM1	Q13255	1194 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	MVP	Q14764	893 aa	Known RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	GEN1	Q17RS7	908 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	CCDC96	Q2M329	555 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	ARL13B	Q3SXY8	428 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	VPS53	Q5VIR6	699 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SWSAP1	Q6NVH7	229 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	ATF7IP	Q6VMQ6	1270 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SPATA31D4	Q6ZUB0	917 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	LCORL	Q8N3X6	602 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	NSUN7	Q8NE18	718 aa	Known RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SLC30A5	Q8TAD4	765 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	IFI44	Q8TCB0	444 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SLC26A6	Q9BXS9	759 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	KRTAP17-1	Q9BYP8	105 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SERHL	Q9NQF3	203 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	TBC1D22B	Q9NU19	505 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	RNF181	Q9P0P0	153 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	RGS17	Q9UGC6	210 aa	Predicted RBP	4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	PACSIN3	Q9UKS6	424 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	HDAC9	Q9UKV0	1011 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	SLC45A1	Q9Y2W3	748 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	AFG3L2	Q9Y4W6	797 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	NR2E3	Q9Y5X4	410 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	MRC1	P22897	1456 aa		4.53	□□□□□ -1.68
PSMD1-208	ENST00000467792	JCAD	Q9P266	1359 aa		4.53	□□□□□ -1.69
PSMD1-208	ENST00000467792	ABCC4	O15439	1325 aa		4.52	□□□□□ -1.69
PSMD1-208	ENST00000467792	PIPSL	A2A3N6	862 aa		4.52	□□□□□ -1.69
PSMD1-208	ENST00000467792	RRN3P2	A6NIE6	340 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms