RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SLITRK1Q96PX8 696 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 XPO6Q96QU8 1125 aaKnown RBP10.91□□□□□ -0.66
HDAC3-203ENST00000467533 NUP58Q9BVL2 599 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 TM9SF3Q9HD45 589 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 MAGEC2Q9UBF1 373 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-203ENST00000467533 STON1Q9Y6Q2 735 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
HDAC3-203ENST00000467533 PLXNA2O75051 1894 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 PAPSS1O43252 624 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-203ENST00000467533 CTDNEP1O95476 244 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 GLDCP23378 1020 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 BDNFP23560 247 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 POLR2BP30876 1174 aaKnown RBP10.9□□□□□ -0.66
HDAC3-203ENST00000467533 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
HDAC3-203ENST00000467533 PSMC1P62191 440 aaKnown RBP10.9□□□□□ -0.66
HDAC3-203ENST00000467533 CYP27A1Q02318 531 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 VAC14Q08AM6 782 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 TAF10Q12962 218 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 ORC1Q13415 861 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 VSTM1Q6UX27 236 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 KCNE4Q8WWG9 221 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 CEP295NLQ96MC4 621 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 SYT15Q9BQS2 421 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 TTLL2Q9BWV7 592 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 BBS2Q9BXC9 721 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 MKRN2Q9H000 416 aaKnown RBP10.9□□□□□ -0.66
HDAC3-203ENST00000467533 LARSQ9P2J5 1176 aaKnown RBP10.9□□□□□ -0.66
HDAC3-203ENST00000467533 ANKMY1Q9P2S6 941 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 CLCA2Q9UQC9 943 aa10.9□□□□□ -0.66
HDAC3-203ENST00000467533 DOPEY2Q9Y3R5 2298 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 CABIN1Q9Y6J0 2220 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 MYO9AB2RTY4 2548 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 A0A1B0GTQ1 180 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 K7ENM7 598 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 KLK10O43240 276 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 CACNG3O60359 315 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 SYNCRIPO60506 623 aaKnown RBP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 ATP2C2O75185 946 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 PIGRP01833 764 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 ITGB3P05106 788 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 ITGAVP06756 1048 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 TYRP14679 529 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 ABCB4P21439 1286 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 CTSKP43235 329 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 LHX1P48742 406 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 DGKGP49619 791 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 ORC2Q13416 577 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 ZNF574Q6ZN55 896 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 TMPRSS6Q8IU80 811 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 DHX40Q8IX18 779 aaKnown RBP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 PCED1AQ9H1Q7 454 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 C6orf106Q9H6K1 298 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-203ENST00000467533 PDRG1Q9NUG6 133 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 AGAP1Q9UPQ3 857 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 SNX9Q9Y5X1 595 aa10.89□□□□□ -0.67
HDAC3-203ENST00000467533 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 F8VP50 259 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 COCHO43405 550 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 DFNA5O60443 496 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 PFKFB2O60825 505 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 IGLV3-19P01714 112 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 GP1BBP13224 206 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 FDPSP14324 419 aaKnown RBP10.88□□□□□ -0.67
HDAC3-203ENST00000467533 C21orf59P57076 290 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
HDAC3-203ENST00000467533 TFAMQ00059 246 aaKnown RBP10.88□□□□□ -0.67
HDAC3-203ENST00000467533 CKAP5Q14008 2032 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 ZRSR1Q15695 479 aaKnown RBP10.88□□□□□ -0.67
HDAC3-203ENST00000467533 KCNT1Q5JUK3 1230 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 TTC38Q5R3I4 469 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 KIAA1614Q5VZ46 1190 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 KRT79Q5XKE5 535 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 ADALQ6DHV7 355 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 SLC39A4Q6P5W5 647 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 FAM171BQ6P995 826 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 KDM7AQ6ZMT4 941 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 TPGS1Q6ZTW0 290 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 EID2Q8N6I1 236 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 ZNF578Q96N58 590 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-203ENST00000467533 TRIM9Q9C026 710 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-203ENST00000467533 KNTC1P50748 2209 aa10.88□□□□□ -0.67
HDAC3-203ENST00000467533 NPHP3-ACAD11A0A0J9YXS1 232 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 TERTO14746 1132 aaKnown RBP10.87□□□□□ -0.67
HDAC3-203ENST00000467533 FSBPO95073 299 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 ZNF132P52740 706 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 MAPRE1Q15691 268 aaKnown RBP10.87□□□□□ -0.67
HDAC3-203ENST00000467533 ATG14Q6ZNE5 492 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 TOP6BLQ8N6T0 577 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 PDZD8Q8NEN9 1154 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 BHMTQ93088 406 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 FBXO32Q969P5 355 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 WBP2Q969T9 261 aa10.87□□□□□ -0.67
HDAC3-203ENST00000467533 ELF4Q99607 663 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms