RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
TSSC4-208ENST00000467308 GNL1P36915 607 aaPredicted RBP16.68■□□□□ 0.26
TSSC4-208ENST00000467308 MAPK8P45983 427 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 SEMA3BQ13214 749 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 IQCB1Q15051 598 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 PREPLQ4J6C6 727 aaPredicted RBP16.68■□□□□ 0.26
TSSC4-208ENST00000467308 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 STXBP4Q6ZWJ1 553 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 PIP4P1Q86T03 277 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 CEP76Q8TAP6 659 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 HMGB4Q8WW32 186 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
TSSC4-208ENST00000467308 ELOVL4Q9GZR5 314 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 SNX25Q9H3E2 840 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 CBX8Q9HC52 389 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 KIAA1586Q9HCI6 787 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 RWDD2AQ9UIY3 292 aa16.68■□□□□ 0.26
TSSC4-208ENST00000467308 MBL2P11226 248 aaPredicted RBP16.67■□□□□ 0.26
TSSC4-208ENST00000467308 EMC10Q5UCC4 262 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 ARMCX6Q7L4S7 300 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 TRMT11Q7Z4G4 463 aaKnown RBP16.67■□□□□ 0.26
TSSC4-208ENST00000467308 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 SMYD4Q8IYR2 804 aaPredicted RBP16.67■□□□□ 0.26
TSSC4-208ENST00000467308 FRMD1Q8N878 549 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 PDZD8Q8NEN9 1154 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 ENOX1Q8TC92 643 aaKnown RBP16.67■□□□□ 0.26
TSSC4-208ENST00000467308 ZNF507Q8TCN5 953 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 ZCCHC14Q8WYQ9 949 aaKnown RBP16.67■□□□□ 0.26
TSSC4-208ENST00000467308 OVCA2Q8WZ82 227 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 RBSNQ9H1K0 784 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 MSRB2Q9Y3D2 182 aa16.67■□□□□ 0.26
TSSC4-208ENST00000467308 TCRBV21S2A2A0A5A6 115 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 SMTNL1A8MU46 457 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 SCAMP3O14828 347 aaKnown RBP16.66■□□□□ 0.26
TSSC4-208ENST00000467308 AP5Z1O43299 807 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 PTPN1P18031 435 aaKnown RBP16.66■□□□□ 0.26
TSSC4-208ENST00000467308 YWHAQP27348 245 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 MYL5Q02045 173 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 GAD2Q05329 585 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 KDSRQ06136 332 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 PAK1Q13153 545 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 DUOXA1Q1HG43 343 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 SLC36A4Q6YBV0 504 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 RABEPKQ7Z6M1 372 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 DHX40Q8IX18 779 aaKnown RBP16.66■□□□□ 0.26
TSSC4-208ENST00000467308 ETFBKMTQ8IXQ9 262 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 PGBD3Q8N328 593 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 SCFD1Q8WVM8 642 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 MRPL45Q9BRJ2 306 aaKnown RBP16.66■□□□□ 0.26
TSSC4-208ENST00000467308 TMEM30AQ9NV96 361 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 HSPBP1Q9NZL4 362 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 NME7Q9Y5B8 376 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 ADAMTS9Q9P2N4 1935 aa16.66■□□□□ 0.26
TSSC4-208ENST00000467308 DSPP15924 2871 aaKnown RBP16.66■□□□□ 0.26
TSSC4-208ENST00000467308 FASNP49327 2511 aaKnown RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 BICDL2A1A5D9 508 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 TBC1D3BA6NDS4 549 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 H0Y626 953 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 HYAL3O43820 417 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 RTN3O95197 1032 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 TRIM16O95361 564 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 SERPINF2P08697 491 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 ITPKAP23677 461 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 TUBP50607 506 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 ATXN3P54252 364 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 CACNA2D1P54289 1103 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 SIM1P81133 766 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 GFPT1Q06210 699 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 COL9A2Q14055 689 aaPredicted RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 SNX30Q5VWJ9 437 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 BTBD8Q5XKL5 378 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 NUDT18Q6ZVK8 323 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 NUP93Q8N1F7 819 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 HDDC3Q8N4P3 179 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 OR6B3Q8NGW1 331 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 ZFRQ96KR1 1074 aaKnown RBP16.65■□□□□ 0.26
TSSC4-208ENST00000467308 MED15Q96RN5 788 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 ZNF518BQ9C0D4 1074 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 FREM2Q5SZK8 3169 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 PCDH15Q96QU1 1955 aa16.65■□□□□ 0.26
TSSC4-208ENST00000467308 FAM221BA6H8Z2 402 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 COCHO43405 550 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 CFIP05156 583 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 RDXP35241 583 aaKnown RBP16.64■□□□□ 0.25
TSSC4-208ENST00000467308 TNNC1P63316 161 aa16.64■□□□□ 0.25
TSSC4-208ENST00000467308 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms