RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ATXN3P54252 364 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 BNC1Q01954 994 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 EHHADHQ08426 723 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 SNRNP35Q16560 246 aaKnown RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 PREPLQ4J6C6 727 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 CNNM4Q6P4Q7 775 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 PDZD3Q86UT5 571 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 NAXDQ8IW45 347 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 PGBD3Q8N328 593 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 RBBP8NLQ8NC74 664 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 ZNF507Q8TCN5 953 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 HPS3Q969F9 1004 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 FBXO32Q969P5 355 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 BBC3Q96PG8 261 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 MMS19Q96T76 1030 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 CGRRF1Q99675 332 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 SNX25Q9H3E2 840 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 FAM124BQ9H5Z6 455 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 CSNK1G1Q9HCP0 422 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 USP36Q9P275 1121 aaKnown RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 PCOLCE2Q9UKZ9 415 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
UBR4-211ENST00000467272 PLXNB3Q9ULL4 1909 aa12.93□□□□□ -0.34
UBR4-211ENST00000467272 ADAMTS9Q9P2N4 1935 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 ABL1P00519 1130 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 IGLV3-19P01714 112 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 ZNF883P0CG24 379 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
UBR4-211ENST00000467272 CLDN10P78369 228 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 E2F4Q16254 413 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 BTBD8Q5XKL5 378 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 Q6ZNB5 142 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 TOGARAM2Q6ZUX3 1019 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 FUKQ8N0W3 1084 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 OR6B3Q8NGW1 331 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 SMOQ99835 787 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 ZDHHC5Q9C0B5 715 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 SLC6A17Q9H1V8 727 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 SCUBE2Q9NQ36 999 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 AGPAT3Q9NRZ7 376 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 KBTBD4Q9NVX7 518 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 OSER1Q9NX31 292 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 WSB2Q9NYS7 404 aaPredicted RBP12.92□□□□□ -0.34
UBR4-211ENST00000467272 GMIPQ9P107 970 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 CYP8B1Q9UNU6 501 aa12.92□□□□□ -0.34
UBR4-211ENST00000467272 EIF3DO15371 548 aaKnown RBP eCLIP12.91□□□□□ -0.344e-9■■■■□ 21.6
UBR4-211ENST00000467272 BEST1O76090 585 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 TBX18O95935 607 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 IDEP14735 1019 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
UBR4-211ENST00000467272 ATICP31939 592 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 WASP42768 502 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 MYL6P60660 151 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 GRIK2Q13002 908 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 COL28A1Q2UY09 1125 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 C19orf48Q6RUI8 117 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 CCDC73Q6ZRK6 1079 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 CADM4Q8NFZ8 388 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 FOXJ1Q92949 421 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 DNAJC17Q9NVM6 304 aaKnown RBP12.91□□□□□ -0.34
UBR4-211ENST00000467272 SUSD2Q9UGT4 822 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 SLC27A6Q9Y2P4 619 aa12.91□□□□□ -0.34
UBR4-211ENST00000467272 A8MXQ7 604 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 KCNJ18B7U540 433 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 WASH3PC4AMC7 463 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 HHLA1C9JL84 531 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 TLR5O60602 858 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 PENKP01210 267 aaPredicted RBP12.9□□□□□ -0.34
UBR4-211ENST00000467272 TYRP14679 529 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 CD6P30203 668 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 SNRPFP62306 86 aaKnown RBP12.9□□□□□ -0.34
UBR4-211ENST00000467272 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 ANO4Q32M45 955 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 PLEKHG6Q3KR16 790 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 NUDT18Q6ZVK8 323 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 TMPRSS7Q7RTY8 843 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 CHPFQ8IZ52 775 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 CRYBG2Q8N1P7 616 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 ZNF276Q8N554 614 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 TMEM174Q8WUU8 243 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 SCFD1Q8WVM8 642 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 MKRN2Q9H000 416 aaKnown RBP12.9□□□□□ -0.34
UBR4-211ENST00000467272 SDCBP2Q9H190 292 aa12.9□□□□□ -0.34
UBR4-211ENST00000467272 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
UBR4-211ENST00000467272 SMYD3Q9H7B4 428 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms