RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 RPN1P04843 607 aaKnown RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 JUPP14923 745 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 DGKGP49619 791 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SLC12A3P55017 1021 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 L1TD1Q5T7N2 865 aaKnown RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 CDCP2Q5VXM1 449 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 KIAA0895LQ68EN5 471 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 TXNDC8Q6A555 127 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 CNNM4Q6P4Q7 775 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 DYMQ7RTS9 669 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 KIAA0907Q7Z7F0 614 aaPredicted RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 CLEC14AQ86T13 490 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 NSUN7Q8NE18 718 aaKnown RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 ZFYVE19Q96K21 471 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 MRGPRX1Q96LB2 322 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 GDF3Q9NR23 364 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SLC27A5Q9Y2P5 690 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 CLEC18AA5D8T8 446 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 TRAK2O60296 914 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 TULP3O75386 442 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SRPRAP08240 638 aaKnown RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 RALAP11233 206 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 ACADVLP49748 655 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 RIPPLY3P57055 190 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 ATP2C1P98194 919 aaPredicted RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 ZNF211Q13398 564 aaPredicted RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SF3A1Q15459 793 aaKnown RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 TAF1BQ53T94 588 aaPredicted RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 DCAF12L1Q5VU92 463 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 C19orf48Q6RUI8 117 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 CLEC18BQ6UXF7 455 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 C12orf56Q8IXR9 622 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 C4orf32Q8N8J7 132 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 MFSD2AQ8NA29 543 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 CLEC18CQ8NCF0 446 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 TTC9Q92623 222 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 FAM131CQ96AQ9 280 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SIPA1Q96FS4 1042 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SMARCD1Q96GM5 515 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 HIC2Q96JB3 615 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SNX25Q9H3E2 840 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 RETREG1Q9H6L5 497 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 DMAP1Q9NPF5 467 aaPredicted RBP6.04□□□□□ -1.44
CXXC4-202ENST00000466963 SCML2Q9UQR0 700 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 WNT6Q9Y6F9 365 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
CXXC4-202ENST00000466963 ZW10O43264 779 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 STX6O43752 255 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ADH1BP00325 375 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 MBL2P11226 248 aaPredicted RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 NDUFV2P19404 249 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 PTGER3P43115 390 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CDH8P55286 799 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 DUOXA2Q1HG44 320 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 STXBP5Q5T5C0 1151 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 WSCD1Q658N2 575 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ZNF776Q68DI1 518 aaPredicted RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 KIAA1211LQ6NV74 962 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 RAB11FIP4Q86YS3 637 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 HPS6Q86YV9 775 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ASB12Q8WXK4 309 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 PHF12Q96QT6 1004 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 TPSD1Q9BZJ3 242 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 TRPC7Q9HCX4 862 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 TMEM74BQ9NUR3 256 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 C2orf42Q9NWW7 574 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 STOML2Q9UJZ1 356 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 HBS1LQ9Y450 684 aaKnown RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CPQQ9Y646 472 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CKAP5Q14008 2032 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 PATE3B3GLJ2 98 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 MAPK13O15264 365 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 SLC16A4O15374 487 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ATP5BP06576 529 aaKnown RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CISD3P0C7P0 127 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 TIE1P35590 1138 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 AFMP43652 599 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CCT2P78371 535 aaKnown RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 TLE3Q04726 772 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 SRSF1Q07955 248 aaKnown RBP eCLIP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 MPPE1Q53F39 396 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CCDC73Q6ZRK6 1079 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 DSG4Q86SJ6 1040 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ARL14EPQ8N8R7 260 aaPredicted RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ZSCAN1Q8NBB4 408 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 OR2T34Q8NGX1 318 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 PGLYRP2Q96PD5 576 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ELF4Q99607 663 aaPredicted RBP6.03□□□□□ -1.44
CXXC4-202ENST00000466963 SH2D3AQ9BRG2 576 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 EFHD1Q9BUP0 239 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 STRA6Q9BX79 667 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 BTBD1Q9H0C5 482 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 POLR1BQ9H9Y6 1135 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CSNK1G1Q9HCP0 422 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CFAP97Q9P2B7 532 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 CCDC39Q9UFE4 941 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 IL17BQ9UHF5 180 aa6.03□□□□□ -1.44
CXXC4-202ENST00000466963 ANKRD6Q9Y2G4 727 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms