RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 OLA1Q9NTK5 396 aaKnown RBP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 OSER1Q9NX31 292 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 GDE1Q9NZC3 331 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 CHORDC1Q9UHD1 332 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-205ENST00000466897 TMEM59LQ9UK28 342 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 FAM50BQ9Y247 325 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 USTQ9Y2C2 406 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 SCINQ9Y6U3 715 aa15.92■□□□□ 0.14
NPHP4-205ENST00000466897 SIGLEC16A6NMB1 481 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 DAB1O75553 588 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 H2AFZP0C0S5 128 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 TMEM253P0C7T8 217 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 RALAP11233 206 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 RRM1P23921 792 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 GALCP54803 685 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 GPC5P78333 572 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 SMAD2Q15796 467 aaKnown RBP15.91■□□□□ 0.14
NPHP4-205ENST00000466897 CLUL1Q15846 466 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 PPP1R15BQ5SWA1 713 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 HECTD3Q5T447 861 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 FAM102AQ5T9C2 384 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-205ENST00000466897 MSANTD2Q6P1R3 559 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 H2AFVQ71UI9 128 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 ITFG1Q8TB96 612 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 ZNF653Q96CK0 615 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 PIWIL1Q96J94 861 aaKnown RBP15.91■□□□□ 0.14
NPHP4-205ENST00000466897 POMKQ9H5K3 350 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 MRPL47Q9HD33 250 aaKnown RBP15.91■□□□□ 0.14
NPHP4-205ENST00000466897 PARVAQ9NVD7 372 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 TMEM51Q9NW97 253 aa15.91■□□□□ 0.14
NPHP4-205ENST00000466897 COL6A3P12111 3177 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 TLR5O60602 858 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 CYP1A2P05177 515 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 FYNP06241 537 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 PTMAP06454 111 aaKnown RBP15.9■□□□□ 0.14
NPHP4-205ENST00000466897 CEBPBP17676 345 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 PGFP49763 221 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 KRT83P78385 493 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 MTF1Q14872 753 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 TCEAL1Q15170 157 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 TEAD2Q15562 447 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 AAK1Q2M2I8 961 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 C2CD6Q53TS8 623 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 BTBD8Q5XKL5 378 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 DNAJC24Q6P3W2 148 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 HFE2Q6ZVN8 426 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 NPAS3Q8IXF0 933 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-205ENST00000466897 CTNNBL1Q8WYA6 563 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-205ENST00000466897 NDRG1Q92597 394 aaKnown RBP15.9■□□□□ 0.14
NPHP4-205ENST00000466897 FAM149B1Q96BN6 582 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 SELENOOQ9BVL4 669 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 THAP2Q9H0W7 228 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 RRN3Q9NYV6 651 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 THEGQ9P2T0 379 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 CNOT8Q9UFF9 292 aaKnown RBP15.9■□□□□ 0.14
NPHP4-205ENST00000466897 CDH22Q9UJ99 828 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 CDH7Q9ULB5 785 aa15.9■□□□□ 0.14
NPHP4-205ENST00000466897 C5orf42Q9H799 3197 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 TRAV19A0A0A6YYK7 116 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 NRG2O14511 850 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-205ENST00000466897 KRT3P12035 628 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 RARGP13631 454 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 NOS2P35228 1153 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 MATKP42679 507 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 MAGEA1P43355 309 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 SLC7A9P82251 487 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 CYP4F8P98187 520 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 NNTQ13423 1086 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 MAMLD1Q13495 774 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 GPR158Q5T848 1215 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 GET4Q7L5D6 327 aaPredicted RBP15.89■□□□□ 0.13
NPHP4-205ENST00000466897 TXLNBQ8N3L3 684 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 FNIP1Q8TF40 1166 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 FGF13Q92913 245 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 NT5C3BQ969T7 300 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 SMOC2Q9H3U7 446 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 METTL5Q9NRN9 209 aaKnown RBP15.89■□□□□ 0.13
NPHP4-205ENST00000466897 UVRAGQ9P2Y5 699 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 PCDHA13Q9Y5I0 950 aa15.89■□□□□ 0.13
NPHP4-205ENST00000466897 C2orf78A6NCI8 922 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 GOLGA8SH3BPF8 625 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 COCHO43405 550 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 NCAM1P13591 858 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 TCF3P15923 654 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 GJA1P17302 382 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 ABCB4P21439 1286 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 ATP5C1P36542 298 aaKnown RBP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 TAF5Q15542 800 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 TXNDC8Q6A555 127 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 PTCRAQ6ISU1 281 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 OTOP3Q7RTS5 596 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 CMTM8Q8IZV2 173 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 KIAA1958Q8N8K9 716 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 RNF139Q8WU17 664 aa15.88■□□□□ 0.13
NPHP4-205ENST00000466897 PGAP3Q96FM1 320 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 DDX23Q9BUQ8 820 aaKnown RBP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 PHF7Q9BWX1 381 aaPredicted RBP15.88■□□□□ 0.13
NPHP4-205ENST00000466897 SLC46A2Q9BY10 475 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms