RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DNERQ8NFT8 737 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 HASPINQ8TF76 798 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SGSM3Q96HU1 749 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SERAC1Q96JX3 654 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 FRMD8P1Q9BZ68 369 aaPredicted RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 MANSC1Q9H8J5 431 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SNX12Q9UMY4 172 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 CNTNAP5Q8WYK1 1306 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 PQBP1O60828 265 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 CYP7B1O75881 506 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 FBXO21O94952 628 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 THP07101 528 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 GSTM1P09488 218 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 FGFR1P11362 822 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ST13P50502 369 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 ITGA8P53708 1063 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 GEMIN4P57678 1058 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 E2F4Q16254 413 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 MPZL3Q6UWV2 235 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 DPP10Q8N608 796 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 DNAJC1Q96KC8 554 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 C9orf72Q96LT7 481 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 PHACTR1Q9C0D0 580 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ZBTB39O15060 712 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 TBC1D12O60347 775 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 HALP42357 657 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 CDK20Q8IZL9 346 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 TUBGCP3Q96CW5 907 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ADI1Q9BV57 179 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 FRMD8Q9BZ67 464 aaPredicted RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 IGFLR1Q9H665 355 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ZNF711Q9Y462 761 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SLIT3O75094 1523 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 LTN1O94822 1766 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SMIM22K7EJ46 135 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ZNF185O15231 689 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 VTNP04004 478 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ALDH2P05091 517 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 AKR1A1P14550 325 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 C4BPBP20851 252 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ADORA2AP29274 412 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 RENBPP51606 427 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ERVK-9P63128 1117 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ERVK-24P63145 666 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 FKBP1BP68106 108 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 NOGQ13253 232 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SLFN11Q7Z7L1 901 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 RSPH1Q8WYR4 309 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 MED8Q96G25 268 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 LRRC1Q9BTT6 524 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 TARS2Q9BW92 718 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 MIEF1Q9NQG6 463 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 XPNPEP3Q9NQH7 507 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 CTNNAL1Q9UBT7 734 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 PSTPIP1O43586 416 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SUPT7LO94864 414 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 F9P00740 461 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 VDRP11473 427 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 CYP2A7P20853 494 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.97□□□□□ -0.97
HPS4-209ENST00000466781 ACTN3Q08043 901 aaPredicted RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 RALGDSQ12967 914 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 TOMM20Q15388 145 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SPACA7Q96KW9 195 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 RNF208Q9H0X6 261 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 C17orf75Q9HAS0 396 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 DIABLOQ9NR28 239 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 TBC1D23Q9NUY8 699 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 ADAM30Q9UKF2 790 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 MYMKA6NI61 221 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 NFIBO00712 420 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 PLA2G6O60733 806 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 CNPP09543 421 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 BCAT1P54687 386 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 VSNL1P62760 191 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SP3Q02447 781 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 NCF4Q15080 339 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 PKN2Q16513 984 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 EDRF1Q3B7T1 1238 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 BOLA3Q53S33 107 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 RASGRP2Q7LDG7 609 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 TRMT11Q7Z4G4 463 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 B3GALNT2Q8NCR0 500 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 USP7Q93009 1102 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 MTERF3Q96E29 417 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SGF29Q96ES7 293 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 FICDQ9BVA6 458 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 KANSL3Q9P2N6 904 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 DCDC2Q9UHG0 476 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 SOX13Q9UN79 622 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 DRG1Q9Y295 367 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 SSU72P8A0A1W2PR75 194 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 GLRA3O75311 464 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 TMEM253P0C7T8 217 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 GRK4P32298 578 aa8.97□□□□□ -0.97
HPS4-209ENST00000466781 FEN1P39748 380 aaKnown RBP8.97□□□□□ -0.97
HPS4-209ENST00000466781 CTCFP49711 727 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms