RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TMEM225BP0DP42 221 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 GYS1P13807 737 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 GKP32189 559 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PAPOLAP51003 745 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 MTAPQ13126 283 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 KCNJ12Q14500 433 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PTPAQ15257 358 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 TAF12Q16514 161 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PARS2Q7L3T8 475 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 MAVSQ7Z434 540 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 WDR53Q7Z5U6 358 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 TRABD2AQ86V40 505 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 CLASRPQ8N2M8 674 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 C11orf44Q8N8P7 122 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 SUPT20HQ8NEM7 779 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 IL17REQ8NFR9 667 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 SCAMP5Q8TAC9 235 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PROKR1Q8TCW9 393 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 ASB10Q8WXI3 467 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 FBXL20Q96IG2 436 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PBKQ96KB5 322 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 COQ10AQ96MF6 247 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 TRAPPC9Q96Q05 1148 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 GPR20Q99678 358 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 DPCDQ9BVM2 203 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 WDR11Q9BZH6 1224 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 TWSG1Q9GZX9 223 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 TAF1DQ9H5J8 278 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PDP2Q9P2J9 529 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 ANKFY1Q9P2R3 1169 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 C19orf53Q9UNZ5 99 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 MAST3O60307 1309 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A18PA6NE21 464 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A16PA6NEW6 464 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A9PA6NNJ1 464 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A5PA8MXJ8 464 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 EIF3FO00303 357 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 NCAM2O15394 837 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 WDHD1O75717 1129 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 LMNAP02545 664 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FESP07332 822 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A15PP0C7V4 464 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A14PP0C7W9 464 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 HKR1P10072 659 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 ZFXP17010 805 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 TGM1P22735 817 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 MMP8P22894 467 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 KLRK1P26718 216 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 GSTM5P46439 218 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 AARSP49588 968 aaKnown RBP eCLIP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 MCM2P49736 904 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 EIF2B5Q13144 721 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 TMEM63BQ5T3F8 832 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM90A2PQ658T7 463 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 LVRNQ6Q4G3 990 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 USP51Q70EK9 711 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 HERC6Q8IVU3 1022 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 SUGP1Q8IWZ8 645 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 LCORLQ8N3X6 602 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 METTL25Q8N6Q8 603 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 SIRT6Q8N6T7 355 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 CPT1BQ92523 772 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 RFKQ969G6 155 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 CTHRC1Q96CG8 243 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 PYM1Q9BRP8 204 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 BRD8Q9H0E9 1235 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 VPS16Q9H269 839 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 FSCN3Q9NQT6 498 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 SERTAD4Q9NUC0 356 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 RRN3Q9NYV6 651 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 NDUFAF4Q9P032 175 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 DAPP1Q9UN19 280 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 CNTN6Q9UQ52 1028 aa5.01□□□□□ -1.61
CDC42BPA-211ENST00000466538 A0A1B0GVC2 190 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 GXYLT2A0PJZ3 443 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 H0Y3Z8 333 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 CTIFO43310 598 aaKnown RBP5□□□□□ -1.61
CDC42BPA-211ENST00000466538 ERBB2P04626 1255 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 RHOP08100 348 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 CD53P19397 219 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 DDIT3P35638 169 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 AVPR1BP47901 424 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 PDE1AP54750 535 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 ACTR2P61160 394 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 SEMA3BQ13214 749 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 FAM110CQ1W6H9 321 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 LSM12Q3MHD2 195 aaKnown RBP5□□□□□ -1.61
CDC42BPA-211ENST00000466538 TBRG1Q3YBR2 411 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 TMEM196Q5HYL7 178 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 ZNF569Q5MCW4 686 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 TTC22Q5TAA0 569 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 KAZNQ674X7 775 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 DENND2CQ68D51 928 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 MSANTD2Q6P1R3 559 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 Q6ZNX1 250 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 PIK3AP1Q6ZUJ8 805 aa5□□□□□ -1.61
CDC42BPA-211ENST00000466538 ZNF551Q7Z340 670 aaPredicted RBP5□□□□□ -1.61
CDC42BPA-211ENST00000466538 DDX51Q8N8A6 666 aaKnown RBP eCLIP5□□□□□ -1.61
CDC42BPA-211ENST00000466538 XAGE5Q8WWM1 108 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms