RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	NBEA	Q8NFP9	2946 aa		9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	HELZ2	Q9BYK8	2649 aa	Known RBP	9.26	□□□□□ -0.93
UBA3-208	ENST00000465627	OR6C75	A6NL08	312 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	TNFRSF10B	O14763	440 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	ZNF185	O15231	689 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	LILRB3	O75022	631 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	SRGAP2	O75044	1071 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	FAM200B	P0CF97	657 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	TCP1	P17987	556 aa	Known RBP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	GTF2F1	P35269	517 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	ACADSB	P45954	432 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	MARCKSL1	P49006	195 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	RGS7	P49802	495 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	MESD	Q14696	234 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	TAF5	Q15542	800 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	MAPRE1	Q15691	268 aa	Known RBP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	SLC8B1	Q6J4K2	584 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	DNAJC24	Q6P3W2	148 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	PEX26	Q7Z412	305 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	ZDHHC17	Q8IUH5	632 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	GPR65	Q8IYL9	337 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	THEM5	Q8N1Q8	247 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	RASGEF1C	Q8N431	466 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	FBXL6	Q8N531	539 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	PHOSPHO2	Q8TCD6	241 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	CLEC4C	Q8WTT0	213 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	PIK3R5	Q8WYR1	880 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	EDA	Q92838	391 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	SMARCD1	Q96GM5	515 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	FUBP3	Q96I24	572 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	MCEE	Q96PE7	176 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	KCNK16	Q96T55	309 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	OXCT2	Q9BYC2	517 aa	Predicted RBP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	PNPLA8	Q9NP80	782 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	IL37	Q9NZH6	218 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	MTRR	Q9UBK8	725 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	AMFR	Q9UKV5	643 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	TTC7A	Q9ULT0	858 aa	Predicted RBP	9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	PCDHB3	Q9Y5E6	796 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	PCDHA3	Q9Y5H8	950 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	BACE2	Q9Y5Z0	518 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	USP3	Q9Y6I4	520 aa		9.25	□□□□□ -0.93
UBA3-208	ENST00000465627	MIF4GD	A9UHW6	222 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	MYO1F	O00160	1098 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	ADAM12	O43184	909 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	CTIF	O43310	598 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	LPXN	O60711	386 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	AP1G2	O75843	785 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	SOD2	P04179	222 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	FYN	P06241	537 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	OR4Q2	P0C623	313 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	KRT3	P12035	628 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	TCF4	P15884	667 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	LAG3	P18627	525 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	BDNF	P23560	247 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	FLT3	P36888	993 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	SLC1A1	P43005	524 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	MAGEA11	P43364	429 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	ALDH7A1	P49419	539 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	TERF1	P54274	439 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	NAP1L1	P55209	391 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	TAS2R40	P59535	323 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	TSPY1	Q01534	308 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	SLC6A3	Q01959	620 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	DSG1	Q02413	1049 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	GPR17	Q13304	367 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	BTG3	Q14201	252 aa	Predicted RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	PUM1	Q14671	1186 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	RPS6KA1	Q15418	735 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	WHAMMP3	Q1A5X7	153 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	OTUD1	Q5VV17	481 aa	Predicted RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	PM20D1	Q6GTS8	502 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	TRIM67	Q6ZTA4	783 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	HERC6	Q8IVU3	1022 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	SCUBE3	Q8IX30	993 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	MSANTD4	Q8NCY6	345 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	MYRIP	Q8NFW9	859 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	IPO4	Q8TEX9	1081 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	ARNTL2	Q8WYA1	636 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	CENPI	Q92674	756 aa	Predicted RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	NT5C3B	Q969T7	300 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	ZNF558	Q96NG5	402 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	TTPAL	Q9BTX7	342 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	HERC2P3	Q9BVR0	1158 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	MIS12	Q9H081	205 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	IRF2BPL	Q9H1B7	796 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	CARD9	Q9H257	536 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	CRISPLD1	Q9H336	500 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	METTL5	Q9NRN9	209 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	ASNSD1	Q9NWL6	643 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	IP6K2	Q9UHH9	426 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	LCMT1	Q9UIC8	334 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	ZNF638	Q14966	1978 aa	Known RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	USP9X	Q93008	2570 aa	Predicted RBP	9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	FAM92A	A1XBS5	289 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	CARNS1	A5YM72	827 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627		F8VP50	259 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	GOLGA8S	H3BPF8	625 aa		9.24	□□□□□ -0.93
UBA3-208	ENST00000465627	PIK3R2	O00459	728 aa		9.24	□□□□□ -0.93

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