RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NAPRTQ6XQN6 538 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 TOGARAM2Q6ZUX3 1019 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 CCDC28AQ8IWP9 274 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 FSTL5Q8N475 847 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-205ENST00000464541 CIPCQ9C0C6 399 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 ARFGAP3Q9NP61 516 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 GJB4Q9NTQ9 266 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 GAR1Q9NY12 217 aaKnown RBP7.01□□□□□ -1.29
PTCD3-205ENST00000464541 SH3BP4Q9P0V3 963 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 MGAT4CQ9UBM8 478 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 SERGEFQ9UGK8 458 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 CA14Q9ULX7 337 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 AOX1Q06278 1338 aa7.01□□□□□ -1.29
PTCD3-205ENST00000464541 ARP10275 920 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 ADRA1DP25100 572 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 DGKQP52824 942 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 BRD3Q15059 726 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 ACOX1Q15067 660 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 MPEG1Q2M385 716 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 RNASE12Q5GAN4 147 aaKnown RBP7□□□□□ -1.29
PTCD3-205ENST00000464541 ABLIM2Q6H8Q1 611 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 TLDC1Q6P9B6 456 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 FBXO38Q6PIJ6 1188 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 ZNF788Q6ZQV5 615 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 METTL25Q8N6Q8 603 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 PNPLA1Q8N8W4 532 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 SUN3Q8TAQ9 357 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 WDR24Q96S15 920 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 PCDHAC1Q9H158 963 aa7□□□□□ -1.29
PTCD3-205ENST00000464541 ZMYND8Q9ULU4 1186 aaPredicted RBP7□□□□□ -1.29
PTCD3-205ENST00000464541 FAM234BA2RU67 622 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 LINC01548A6NM66 108 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 BTBD19C9JJ37 291 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 PLA2G6O60733 806 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 WDR47O94967 919 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 NDST3O95803 873 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 TMEM225BP0DP42 221 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 DIO1P49895 249 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 PROK1P58294 105 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 PSG6Q00889 435 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 NSUN2Q08J23 767 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTCD3-205ENST00000464541 ATP1A4Q13733 1029 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTCD3-205ENST00000464541 C11orf44Q8N8P7 122 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 GLIS1Q8NBF1 620 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 SEMA6DQ8NFY4 1073 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 FYTTD1Q96QD9 318 aaKnown RBP6.99□□□□□ -1.29
PTCD3-205ENST00000464541 NUDT22Q9BRQ3 303 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 STK33Q9BYT3 514 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 RXFP3Q9NSD7 469 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 FNIP2Q9P278 1114 aa6.99□□□□□ -1.29
PTCD3-205ENST00000464541 PDE8BO95263 885 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 PRKCGP05129 697 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 CHRM5P08912 532 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-205ENST00000464541 FPR3P25089 353 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 LMAN2Q12907 356 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 SLC10A2Q12908 348 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-205ENST00000464541 PROSER3Q2NL68 480 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 BCDIN3DQ7Z5W3 292 aaKnown RBP6.98□□□□□ -1.29
PTCD3-205ENST00000464541 MORC1Q86VD1 984 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 LINC01465Q8N7H1 131 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 KIAA1191Q96A73 305 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 MMS19Q96T76 1030 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■□□□ 13.5
PTCD3-205ENST00000464541 AS3MTQ9HBK9 375 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 PCDHGB2Q9Y5G2 931 aa6.98□□□□□ -1.29
PTCD3-205ENST00000464541 POC1B-GALNT4F8VUJ3 575 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 UBE2Q2LH0YL09 131 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 PODXLO00592 558 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 EXOC3O60645 756 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 SETSIPP0DME0 302 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 ABCB4P21439 1286 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 MCM5P33992 734 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 RENBPP51606 427 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 MTAPQ13126 283 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 FHL3Q13643 280 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 RAP1GAP2Q684P5 730 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 GALNT4Q8N4A0 578 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 SLC39A13Q96H72 371 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 TMEM41AQ96HV5 264 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 MACROD1Q9BQ69 325 aa6.97□□□□□ -1.29
PTCD3-205ENST00000464541 ADAMTS3O15072 1205 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 RBMXL2O75526 392 aaKnown RBP6.96□□□□□ -1.3
PTCD3-205ENST00000464541 GLP2RO95838 553 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 MT-CO3P00414 261 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 VIPP01282 170 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 PPM1AP35813 382 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 TECP42680 631 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 TUBA4AP68366 448 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
PTCD3-205ENST00000464541 CFHR3Q02985 330 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 TFF2Q03403 129 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 KIAA1614Q5VZ46 1190 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 DPY19L2P1Q6NXN4 242 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 XRRA1Q6P2D8 792 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 SYTL1Q8IYJ3 562 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 C12orf76Q8N812 135 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-205ENST00000464541 ADAMTS18Q8TE60 1221 aa6.96□□□□□ -1.3
PTCD3-205ENST00000464541 CINPQ9BW66 212 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms