RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 BOLA3Q53S33 107 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 ZC3H18Q86VM9 953 aaKnown RBP11.41□□□□□ -0.58
PITRM1-209ENST00000464395 MCUQ8NE86 351 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 RFWD2Q8NHY2 731 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 OXNAD1Q96HP4 312 aaPredicted RBP11.41□□□□□ -0.58
PITRM1-209ENST00000464395 SIGLEC10Q96LC7 697 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 OLFM3Q96PB7 478 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 MKS1Q9NXB0 559 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.41□□□□□ -0.58
PITRM1-209ENST00000464395 MORF4L1Q9UBU8 362 aa11.41□□□□□ -0.58
PITRM1-209ENST00000464395 SLC15A5A6NIM6 579 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 UNCXA6NJT0 531 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 H3BRB1 525 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 SPTLC1O15269 473 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 RFPL1O75677 317 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 WFS1O76024 890 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 METTL18O95568 372 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 SCNN1AP37088 669 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 MSH2P43246 934 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 RGS7P49802 495 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 CCNG1P51959 295 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 BBS9Q3SYG4 887 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 OR6B2Q6IFH4 312 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 PDIK1LQ8N165 341 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 TAB3Q8N5C8 712 aaPredicted RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 FAM172AQ8WUF8 416 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 C18orf25Q96B23 403 aaPredicted RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 ALKBH8Q96BT7 664 aaKnown RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 TUT1Q9H6E5 874 aaKnown RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 ETNK2Q9NVF9 386 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 ZNF180Q9UJW8 692 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 AKT3Q9Y243 479 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 SLC45A1Q9Y2W3 748 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 GCATO75600 419 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 DGKIO75912 1065 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 GSRP00390 522 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 GM2AP17900 193 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 ATXN1P54253 815 aaKnown RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 TFDP2Q14188 446 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 SLC45A4Q5BKX6 768 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 DARS2Q6PI48 645 aaKnown RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 C1orf228Q6PIY5 440 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 ACOT1Q86TX2 421 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 CRYBG2Q8N1P7 616 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
PITRM1-209ENST00000464395 INPP5DQ92835 1189 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 APOPT1Q96IL0 206 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 CYTH2Q99418 400 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 NRDE2Q9H7Z3 1164 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 LNPEPQ9UIQ6 1025 aa11.4□□□□□ -0.58
PITRM1-209ENST00000464395 PATJQ8NI35 1801 aa11.4□□□□□ -0.59
PITRM1-209ENST00000464395 MBLAC1A4D2B0 266 aaPredicted RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 KLF11O14901 512 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 DLDP09622 509 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 BASP1P80723 227 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 C9orf57Q5W0N0 161 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 SLC26A9Q7LBE3 791 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 LRRC52Q8N7C0 313 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 SKA1Q96BD8 255 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 MRRFQ96E11 262 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 PTCD3Q96EY7 689 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 SYNCQ9H7C4 482 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 ETNK1Q9HBU6 452 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 SNTG2Q9NY99 539 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 PAK5Q9P286 719 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 DOCK3Q8IZD9 2030 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 DNAJC6O75061 913 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 TGDSO95455 350 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 GRB14Q14449 540 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 DCAF4L1Q3SXM0 396 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 DUSP28Q4G0W2 176 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 UBXN11Q5T124 520 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 UNC93AQ86WB7 457 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 NT5C3BQ969T7 300 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 KLHL29Q96CT2 875 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 ERP27Q96DN0 273 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 THOC1Q96FV9 657 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 KLF6Q99612 283 aaPredicted RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 MFHAS1Q9Y4C4 1052 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 FAM159BA6NKW6 160 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 UGT1A9O60656 530 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 SPAG6O75602 509 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 ZNF200P98182 395 aaPredicted RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 GBE1Q04446 702 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 PTK7Q13308 1070 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 USP50Q70EL3 339 aaPredicted RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 ZDHHC17Q8IUH5 632 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 MPP5Q8N3R9 675 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 GPRC5AQ8NFJ5 357 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 LRRC8CQ8TDW0 803 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 PAIP2Q9BPZ3 127 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 TRIM56Q9BRZ2 755 aaKnown RBP11.39□□□□□ -0.59
PITRM1-209ENST00000464395 UGT1A7Q9HAW7 530 aa11.39□□□□□ -0.59
PITRM1-209ENST00000464395 UGT1A10Q9HAW8 530 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms