RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 TIE1P35590 1138 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 EIF2DP41214 584 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 YWHAEP62258 255 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 BTBD8Q5XKL5 378 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 ARHGAP17Q68EM7 881 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 CCDC186Q7Z3E2 898 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 SCD5Q86SK9 330 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 MIB1Q86YT6 1006 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 CAMKK1Q8N5S9 505 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 GPR161Q8N6U8 529 aaKnown RBP20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 CCDC26Q8TAB7 109 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 SPHK2Q9NRA0 654 aa20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCHCR1-210ENST00000464012 WDR87Q6ZQQ6 2873 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 BICDL2A1A5D9 508 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 APBB3O95704 486 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 DGKEP52429 567 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 SLC8A3P57103 927 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 RSPO4Q2I0M5 234 aaPredicted RBP20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 SGO2Q562F6 1265 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 PIGZQ86VD9 579 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 TTC30AQ86WT1 665 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 TMEM25Q86YD3 366 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 TSTD1Q8NFU3 115 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 ZDHHC4Q9NPG8 344 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 RASAL2Q9UJF2 1139 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 DNMT3LQ9UJW3 386 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 TSPAN16Q9UKR8 245 aa20.28■□□□□ 0.84
CCHCR1-210ENST00000464012 DMXL1Q9Y485 3027 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 MYO18AQ92614 2054 aaKnown RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 CCDC163A0A0D9SF12 145 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 TULP2O00295 520 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 HOXC11O43248 304 aaPredicted RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 KLF8O95600 359 aaPredicted RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 RALAP11233 206 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 TBXAS1P24557 533 aaPredicted RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 PAK1Q13153 545 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 TPGS1Q6ZTW0 290 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 HTR3DQ70Z44 454 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 KBTBD6Q86V97 674 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 ALLCQ8N6M5 410 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 ANKRD52Q8NB46 1076 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 NT5C1BQ96P26 610 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 TPSD1Q9BZJ3 242 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 FAM124BQ9H5Z6 455 aaPredicted RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 MMP17Q9ULZ9 603 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 USP3Q9Y6I4 520 aa20.27■□□□□ 0.84
CCHCR1-210ENST00000464012 NEDD8-MDP1E9PL57 170 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 GREM1O60565 184 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 TULP3O75386 442 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 HMBSP08397 361 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 TGM1P22735 817 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 GRIA2P42262 883 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 PSEN1P49768 467 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 BCAT1P54687 386 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 LMNB2Q03252 620 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 PDE4CQ08493 712 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 CAMK4Q16566 473 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 EMC10Q5UCC4 262 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 CACNA2D4Q7Z3S7 1137 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 TADA2BQ86TJ2 420 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 ETFBKMTQ8IXQ9 262 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 PPM1KQ8N3J5 372 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 KAT5Q92993 513 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 BHMTQ93088 406 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 BBS2Q9BXC9 721 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 HESX1Q9UBX0 185 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 THADAQ6YHU6 1953 aa20.26■□□□□ 0.83
CCHCR1-210ENST00000464012 TRIM24O15164 1050 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 PLA2G4AP47712 749 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 TKTL1P51854 596 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 MRPS21P82921 87 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 BST2Q10589 180 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 EFEMP1Q12805 493 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 CCDC6Q16204 474 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 RAB41Q5JT25 222 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 ANO7Q6IWH7 933 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 KLHDC10Q6PID8 442 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 TMEM270Q6UE05 265 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 PHTF2Q8N3S3 785 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 UBR7Q8N806 425 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 TXNDC5Q8NBS9 432 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 UBA3Q8TBC4 463 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 NDRG1Q92597 394 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 ULBP1Q9BZM6 244 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 SEMA4GQ9NTN9 838 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 DNAJC17Q9NVM6 304 aaKnown RBP20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 CLIC5Q9NZA1 410 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 DEC1Q9P2X7 70 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 INVSQ9Y283 1065 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 PCDHB4Q9Y5E5 795 aa20.25■□□□□ 0.83
CCHCR1-210ENST00000464012 TBC1D3BA6NDS4 549 aa20.24■□□□□ 0.83
CCHCR1-210ENST00000464012 XPO1O14980 1071 aaKnown RBP20.24■□□□□ 0.83
CCHCR1-210ENST00000464012 DCLK1O15075 740 aa20.24■□□□□ 0.83
CCHCR1-210ENST00000464012 STC2O76061 302 aa20.24■□□□□ 0.83
CCHCR1-210ENST00000464012 VDRP11473 427 aa20.24■□□□□ 0.83
CCHCR1-210ENST00000464012 YWHAGP61981 247 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCHCR1-210ENST00000464012 UBE2HP62256 183 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms