RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 MINDY4Q4G0A6 757 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 CC2D1BQ5T0F9 858 aaKnown RBP5□□□□□ -1.61
ITGB1-208ENST00000464001 SWSAP1Q6NVH7 229 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 APOA5Q6Q788 366 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 DEF8Q6ZN54 512 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 ZDHHC17Q8IUH5 632 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 YAF2Q8IY57 180 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 C12orf76Q8N812 135 aaPredicted RBP5□□□□□ -1.61
ITGB1-208ENST00000464001 VCPIP1Q96JH7 1222 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 ZNF668Q96K58 619 aaPredicted RBP5□□□□□ -1.61
ITGB1-208ENST00000464001 FOXP1Q9H334 677 aaPredicted RBP5□□□□□ -1.61
ITGB1-208ENST00000464001 FAM83DQ9H4H8 585 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 FAM204AQ9H8W3 233 aa5□□□□□ -1.61
ITGB1-208ENST00000464001 TTC3P53804 2025 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 LY6G6EA0A0G2JKS1 128 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 AQP7P3A6NL99 342 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 A8MVJ9 347 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 TLR2O60603 784 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 INMTO95050 263 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 ATF7P17544 494 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-208ENST00000464001 TPH1P17752 444 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 CPT1AP50416 773 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 CACNB3P54284 484 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 RPS13P62277 151 aaKnown RBP4.99□□□□□ -1.61
ITGB1-208ENST00000464001 TRIM71Q2Q1W2 868 aaKnown RBP4.99□□□□□ -1.61
ITGB1-208ENST00000464001 VPS50Q96JG6 964 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 ZCWPW1Q9H0M4 648 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 POT1Q9NUX5 634 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 RGS17Q9UGC6 210 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-208ENST00000464001 STEAP1Q9UHE8 339 aa4.99□□□□□ -1.61
ITGB1-208ENST00000464001 CCDC194A0A1B0GVG4 234 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 FAM90A10PA6NDY2 464 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 RAB27BO00194 218 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 CLIC1O00299 241 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 PRPF3O43395 683 aaKnown RBP4.98□□□□□ -1.61
ITGB1-208ENST00000464001 SNX2O60749 519 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 PARP1P09874 1014 aaKnown RBP4.98□□□□□ -1.61
ITGB1-208ENST00000464001 ACVR2AP27037 513 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 STK3Q13188 491 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 ST3GAL2Q16842 350 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 PLEKHG6Q3KR16 790 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 C3orf38Q5JPI3 329 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 ANKRD13BQ86YJ7 626 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 PNPLA1Q8N8W4 532 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 MORC4Q8TE76 937 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 IPCEF1Q8WWN9 437 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-208ENST00000464001 WDYHV1Q96HA8 205 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 HIC2Q96JB3 615 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 LRRC27Q9C0I9 530 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 TMEM184CQ9NVA4 438 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 OGDHLQ9ULD0 1010 aa4.98□□□□□ -1.61
ITGB1-208ENST00000464001 NOB1Q9ULX3 412 aaKnown RBP4.98□□□□□ -1.61
ITGB1-208ENST00000464001 G3BP2Q9UN86 482 aaKnown RBP4.98□□□□□ -1.61
ITGB1-208ENST00000464001 OAZ2O95190 189 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 CBSLP0DN79 551 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 TXNP10599 105 aaKnown RBP4.97□□□□□ -1.61
ITGB1-208ENST00000464001 CTSAP10619 480 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 ADRA1DP25100 572 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 TACR3P29371 465 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 MCM5P33992 734 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 CBSP35520 551 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 RPS16P62249 146 aaKnown RBP4.97□□□□□ -1.61
ITGB1-208ENST00000464001 HSF1Q00613 529 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 FMO1Q01740 532 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 CFHR1Q03591 330 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 SEC23BQ15437 767 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 PFKFB3Q16875 520 aaPredicted RBP4.97□□□□□ -1.61
ITGB1-208ENST00000464001 ARHGAP29Q52LW3 1261 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 FAM102BQ5T8I3 360 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 UBE2Q1Q7Z7E8 422 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 PMM1Q92871 262 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 EDC3Q96F86 508 aaKnown RBP4.97□□□□□ -1.61
ITGB1-208ENST00000464001 HIST1H2AAQ96QV6 131 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 CHST8Q9H2A9 424 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 DKK4Q9UBT3 224 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 MID2Q9UJV3 735 aa4.97□□□□□ -1.61
ITGB1-208ENST00000464001 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.96□□□□□ -1.62
ITGB1-208ENST00000464001 AGPSO00116 658 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 CNOT3O75175 753 aaKnown RBP4.96□□□□□ -1.62
ITGB1-208ENST00000464001 CCKBRP32239 447 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 THBS4P35443 961 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 ME1P48163 572 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 LINC00205P59089 165 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 TXNL4AP83876 142 aaKnown RBP4.96□□□□□ -1.62
ITGB1-208ENST00000464001 SRSF1Q07955 248 aaKnown RBP eCLIP4.96□□□□□ -1.62
ITGB1-208ENST00000464001 FAM110CQ1W6H9 321 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 SLC9C1Q4G0N8 1177 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 HSP90AB2PQ58FF8 381 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 ODR4Q5SWX8 454 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 RNF220Q5VTB9 566 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 MZT2AQ6P582 158 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 CRELD2Q6UXH1 353 aaPredicted RBP4.96□□□□□ -1.62
ITGB1-208ENST00000464001 PIP4P1Q86T03 277 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 PIM3Q86V86 326 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.96□□□□□ -1.62
ITGB1-208ENST00000464001 METTL25Q8N6Q8 603 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 C11orf44Q8N8P7 122 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 FAM71DQ8N9W8 422 aa4.96□□□□□ -1.62
ITGB1-208ENST00000464001 LRTOMTQ8WZ04 291 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms