RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SLC4A11Q8NBS3 891 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 NETO1Q8TDF5 533 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 WBP2Q969T9 261 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 TMEM176AQ96HP8 235 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 NACA2Q9H009 215 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 NMUR1Q9HB89 426 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 CLIC5Q9NZA1 410 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 CDV3Q9UKY7 258 aaKnown RBP21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 MYOFQ9NZM1 2061 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 PMM2O15305 246 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 CYP26A1O43174 497 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 PPP1R2P41236 205 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 DGKEP52429 567 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 CRY1Q16526 586 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 PLK5Q496M5 336 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 C2orf27AQ580R0 203 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 TSTD1Q8NFU3 115 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 TATDN2Q93075 761 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 SLC35C1Q96A29 364 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 DHTKD1Q96HY7 919 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 CNOT6LQ96LI5 555 aaKnown RBP21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 HEXIM2Q96MH2 286 aaKnown RBP21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 ARHGEF4Q9NR80 690 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 MARK1Q9P0L2 795 aa21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.65■■□□□ 1.06
PDLIM4-205ENST00000463615 SLC30A4O14863 429 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 TBX18O95935 607 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 ZNF806P0C7X5 589 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 PLA2G4AP47712 749 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 GOLGA8FQ08AF8 430 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 GOLGA8DPQ0D2H9 430 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 RAB41Q5JT25 222 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 PLA2G2CQ5R387 149 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 BTBD8Q5XKL5 378 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 SCD5Q86SK9 330 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 TADA2BQ86TJ2 420 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 C11orf74Q86VG3 221 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 TMEM25Q86YD3 366 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 IL17RCQ8NAC3 791 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 CDK5RAP1Q96SZ6 601 aaKnown RBP21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 ARID3AQ99856 593 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 METTL14Q9HCE5 456 aaKnown RBP21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 ARMCX3Q9UH62 379 aaPredicted RBP21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 DNMT3LQ9UJW3 386 aa21.64■■□□□ 1.05
PDLIM4-205ENST00000463615 NCOR2Q9Y618 2525 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 A0A1W2PQH9 124 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 ANTXRLA6NF34 631 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 PSMA7O14818 248 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 TULP3O75386 442 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 RARGP13631 454 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 SEC13P55735 322 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 ZNF394Q53GI3 561 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 Q6ZNB5 142 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 ANKRD52Q8NB46 1076 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 ERCC4Q92889 916 aaPredicted RBP21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 CEP63Q96MT8 703 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 DUSP15Q9H1R2 295 aaPredicted RBP21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 LSM7Q9UK45 103 aaKnown RBP21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 STARD13Q9Y3M8 1113 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 RALGAPA1Q6GYQ0 2036 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 SDK1Q7Z5N4 2213 aa21.63■■□□□ 1.05
PDLIM4-205ENST00000463615 TRIM49BA6NDI0 452 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 CACNG3O60359 315 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 LIMK1P53667 647 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 STIM1Q13586 685 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 CUL2Q13617 745 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 DCAF17Q5H9S7 520 aaPredicted RBP21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 EOGTQ5NDL2 527 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 TCERG1LQ5VWI1 586 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 SFTPA1Q8IWL2 248 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 UBR7Q8N806 425 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 OLIG1Q8TAK6 271 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 JAKMIP2Q96AA8 810 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 ARRDC1-AS1Q9H2J1 176 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 WDR35Q9P2L0 1181 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 DEC1Q9P2X7 70 aa21.62■■□□□ 1.05
PDLIM4-205ENST00000463615 MED19A0JLT2 244 aaPredicted RBP21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 RHOBTB1O94844 696 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 IRF1P10914 325 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 RALAP11233 206 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 HNRNPLP14866 589 aaKnown RBP eCLIP21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 YWHAEP62258 255 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 USP39Q53GS9 565 aaKnown RBP21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 TMEM92Q6UXU6 159 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 NUDT18Q6ZVK8 323 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 PIGZQ86VD9 579 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 ARHGAP18Q8N392 663 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 CCDC33Q8N5R6 958 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 ALLCQ8N6M5 410 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 TERB1Q8NA31 727 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 NAGPAQ9UK23 515 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 MAN1B1Q9UKM7 699 aa21.61■■□□□ 1.05
PDLIM4-205ENST00000463615 SGK1O00141 431 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 ADAM23O75077 832 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 ALDH1A2O94788 518 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 KLF8O95600 359 aaPredicted RBP21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 CD44P16070 742 aaKnown RBP21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 TBXAS1P24557 533 aaPredicted RBP21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 KDSRQ06136 332 aa21.6■■□□□ 1.05
PDLIM4-205ENST00000463615 ELF2Q15723 593 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms