RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PLA2G4AP47712 749 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 MFAP3P55082 362 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-202ENST00000463440 TRIM65Q6PJ69 517 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 RHBDF2Q6PJF5 856 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 HTR3DQ70Z44 454 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 ZBTB44Q8NCP5 570 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 NELL1Q92832 810 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 KREMEN1Q96MU8 473 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.06■□□□□ 0.32
COL1A1-202ENST00000463440 FANCMQ8IYD8 2048 aa17.06■□□□□ 0.32
COL1A1-202ENST00000463440 ZFHX2Q9C0A1 2572 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-202ENST00000463440 M0QYV0 167 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 RNF40O75150 1001 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 ADH5P11766 374 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 TDGF1P13385 188 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 KRT5P13647 590 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 BRD2P25440 801 aaKnown RBP17.05■□□□□ 0.32
COL1A1-202ENST00000463440 OPRD1P41143 372 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 ZNF132P52740 706 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 YWHAGP61981 247 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL1A1-202ENST00000463440 GAD2Q05329 585 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 MAN2A1Q16706 1144 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 EXOC3L4Q17RC7 722 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 PKDCCQ504Y2 493 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 LY6G5CQ5SRR4 150 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 PM20D1Q6GTS8 502 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 RSRC2Q7L4I2 434 aaKnown RBP17.05■□□□□ 0.32
COL1A1-202ENST00000463440 BBS7Q8IWZ6 715 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 SIX6OS1Q8N1H7 587 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 KCTD13Q8WZ19 329 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 ULBP1Q9BZM6 244 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 CNTN6Q9UQ52 1028 aa17.05■□□□□ 0.32
COL1A1-202ENST00000463440 MDM4O15151 490 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 SLC9A1P19634 815 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 EIF2DP41214 584 aaKnown RBP17.04■□□□□ 0.32
COL1A1-202ENST00000463440 COG7P83436 770 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 ADIGQ0VDE8 80 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 GAB4Q2WGN9 574 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 BTBD8Q5XKL5 378 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 MIB1Q86YT6 1006 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 SECISBP2LQ93073 1101 aaKnown RBP17.04■□□□□ 0.32
COL1A1-202ENST00000463440 WBP2Q969T9 261 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 SPHK2Q9NRA0 654 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 RASAL2Q9UJF2 1139 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 STRIP2Q9ULQ0 834 aa17.04■□□□□ 0.32
COL1A1-202ENST00000463440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-202ENST00000463440 CHURC1-FNTBB4DL54 471 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 LILRB5O75023 590 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 MBD3O95983 291 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-202ENST00000463440 EFEMP1Q12805 493 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 RBM43Q6ZSC3 357 aaKnown RBP17.03■□□□□ 0.32
COL1A1-202ENST00000463440 SCML4Q8N228 414 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 SLC35F5Q8WV83 523 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 PNKPQ96T60 521 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 NDST4Q9H3R1 872 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 CNGB3Q9NQW8 809 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 OLA1Q9NTK5 396 aaKnown RBP17.03■□□□□ 0.32
COL1A1-202ENST00000463440 APEX2Q9UBZ4 518 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 SLC8A2Q9UPR5 921 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
COL1A1-202ENST00000463440 K7ESF4 209 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 HOXC11O43248 304 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-202ENST00000463440 MED7O43513 233 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 GREM1O60565 184 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 STC2O76061 302 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 CALCAP01258 141 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 APODP05090 189 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 LCP1P13796 627 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 PON1P27169 355 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 HOXA6P31267 233 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 SLC6A11P48066 632 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 RGS7P49802 495 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 ANO4Q32M45 955 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 PREPLQ4J6C6 727 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-202ENST00000463440 VWA3BQ502W6 1294 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 HSP90AA4PQ58FG1 418 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 PMF1Q6P1K2 205 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 PKN3Q6P5Z2 889 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 RPLP0P6Q8NHW5 317 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 RNF139Q8WU17 664 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 NDRG1Q92597 394 aaKnown RBP17.02■□□□□ 0.32
COL1A1-202ENST00000463440 EZH1Q92800 747 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-202ENST00000463440 ACDQ96AP0 544 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 HSFY1Q96LI6 401 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 DCLK3Q9C098 648 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 C2orf42Q9NWW7 574 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 MARCH2Q9P0N8 246 aa17.02■□□□□ 0.32
COL1A1-202ENST00000463440 MYOFQ9NZM1 2061 aa17.01■□□□□ 0.31
COL1A1-202ENST00000463440 KCNJ18B7U540 433 aa17.01■□□□□ 0.31
COL1A1-202ENST00000463440 PES1O00541 588 aaKnown RBP17.01■□□□□ 0.31
COL1A1-202ENST00000463440 USP8P40818 1118 aa17.01■□□□□ 0.31
COL1A1-202ENST00000463440 DAOAP59103 153 aa17.01■□□□□ 0.31
COL1A1-202ENST00000463440 KCNJ12Q14500 433 aa17.01■□□□□ 0.31
COL1A1-202ENST00000463440 MEA1Q16626 185 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms