RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 SNX27Q96L92 541 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 ZNF670Q9BS34 389 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 MUC3BQ9H195 1237 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 VPS11Q9H270 941 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 MRPL40Q9NQ50 206 aaKnown RBP12.19□□□□□ -0.46
RBM39-223ENST00000463004 F2P00734 622 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 MIPP30301 263 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 CRHR2Q13324 411 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 C3orf62Q6ZUJ4 267 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 STRADAQ7RTN6 431 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 DEFB106AQ8N104 65 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 GDAP1Q8TB36 358 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 SPPL2BQ8TCT7 592 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 SKA2Q8WVK7 121 aaPredicted RBP12.19□□□□□ -0.46
RBM39-223ENST00000463004 DUSP16Q9BY84 665 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 SQORQ9Y6N5 450 aa12.19□□□□□ -0.46
RBM39-223ENST00000463004 FAM47DPA6NHR8 397 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 PYGLP06737 847 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SLC10A3P09131 477 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 TYMPP19971 482 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SCNN1AP37088 669 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 WSCD1Q658N2 575 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 ZBTB9Q96C00 473 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 PABPC5Q96DU9 382 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 LRRC19Q9H756 370 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 DNALI1O14645 258 aaPredicted RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 CD52P31358 61 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 ORC1Q13415 861 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 KCNA10Q16322 511 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 AARS2Q5JTZ9 985 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 ACAD11Q709F0 780 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 FAM131BQ86XD5 332 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 NUDCD3Q8IVD9 361 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 EMC1Q8N766 993 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 TTC17Q96AE7 1141 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 MYH6P13533 1939 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SLC12A8A0AV02 714 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SNX2O60749 519 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SMIM24O75264 130 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 HOXB8P17481 243 aaPredicted RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 ATN1P54259 1190 aaPredicted RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 LRRC6Q86X45 466 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.18□□□□□ -0.46
RBM39-223ENST00000463004 SEMA4DQ92854 862 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SRPK1Q96SB4 655 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 CINPQ9BW66 212 aaPredicted RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 PRKD2Q9BZL6 878 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 CACYBPQ9HB71 228 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 TXNRD2Q9NNW7 524 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 GDF3Q9NR23 364 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 CSH1P0DML2 217 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 CSH2P0DML3 217 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 PYGMP11217 842 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 KDELR1P24390 212 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 SLC8A1P32418 973 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 HSD17B3P37058 310 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 CACNB2Q08289 660 aaPredicted RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 ZKSCAN8Q15776 578 aaPredicted RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 BRMS1LQ5PSV4 323 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 TTC23LQ6PF05 361 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 BBS12Q6ZW61 710 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 UCMAQ8WVF2 138 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.18□□□□□ -0.46
RBM39-223ENST00000463004 APOBEC2Q9Y235 224 aaKnown RBP12.18□□□□□ -0.46
RBM39-223ENST00000463004 SLC30A1Q9Y6M5 507 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 CLUHO75153 1309 aa12.18□□□□□ -0.46
RBM39-223ENST00000463004 FSCN2O14926 492 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 SYN3O14994 580 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 TIMM44O43615 452 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 ATP9BO43861 1147 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 CCDC22O60826 627 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 XYLBO75191 536 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 IFT88Q13099 833 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 USP41Q3LFD5 358 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 APTXQ7Z2E3 356 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 C9orf72Q96LT7 481 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 ZIM3Q96PE6 472 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 SERPINI1Q99574 410 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 EML4Q9HC35 981 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.17□□□□□ -0.46
RBM39-223ENST00000463004 GRID1Q9ULK0 1009 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 E5RI56 91 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 ADAMTS3O15072 1205 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 TREHO43280 583 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 MBL2P11226 248 aaPredicted RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 YBX3P16989 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
RBM39-223ENST00000463004 PREPLQ4J6C6 727 aaPredicted RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 ARHGAP17Q68EM7 881 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 RSRC1Q96IZ7 334 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 ULBP1Q9BZM6 244 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 NDE1Q9NXR1 346 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms