RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 EGFLAMQ63HQ2 1017 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 VSTM1Q6UX27 236 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 DENND5BQ6ZUT9 1274 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 PGBD3Q8N328 593 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 LRRC52Q8N7C0 313 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 IPO4Q8TEX9 1081 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 MYLPFQ96A32 169 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 OTUB2Q96DC9 234 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 C8orf76Q96K31 380 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 FAM84AQ96KN4 292 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 MRGPRX1Q96LB2 322 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 ACOX2Q99424 681 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 STRA6Q9BX79 667 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 IKZF4Q9H2S9 585 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 USP36Q9P275 1121 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 AGO2Q9UKV8 859 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 NME7Q9Y5B8 376 aa8.23□□□□□ -1.09
SMC3-202ENST00000462899 NYNRINQ9P2P1 1898 aaKnown RBP8.23□□□□□ -1.09
SMC3-202ENST00000462899 TEX15Q9BXT5 2789 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 SPENQ96T58 3664 aaKnown RBP8.22□□□□□ -1.09
SMC3-202ENST00000462899 RELNP78509 3460 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 A0A1B0GTW7 788 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 FLRT2O43155 660 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ZBTB24O43167 697 aaPredicted RBP8.22□□□□□ -1.09
SMC3-202ENST00000462899 TLX3O43711 291 aaPredicted RBP8.22□□□□□ -1.09
SMC3-202ENST00000462899 TRAK2O60296 914 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 GREM1O60565 184 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ATP2C2O75185 946 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 CILPO75339 1184 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 IL18RAPO95256 599 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ITGB3P05106 788 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 MAOBP27338 520 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ABCG1P45844 678 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 PPP3CCP48454 512 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 LHX1P48742 406 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 GAD2Q05329 585 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ADALQ6DHV7 355 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 DESI1Q6ICB0 168 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 LYPD8Q6UX82 237 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 SPATA2LQ8IUW3 424 aaPredicted RBP8.22□□□□□ -1.09
SMC3-202ENST00000462899 BRSK2Q8IWQ3 736 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 SCN4BQ8IWT1 228 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ADGRF2Q8IZF7 708 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 GALNT15Q8N3T1 639 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 ZSWIM2Q8NEG5 633 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 LRRN4Q8WUT4 740 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 FOXJ1Q92949 421 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 WBP2Q969T9 261 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 SLC6A17Q9H1V8 727 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 PARVGQ9HBI0 331 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 TM7SF3Q9NS93 570 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 BLOC1S4Q9NUP1 217 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 SMPD4Q9NXE4 827 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 WSB2Q9NYS7 404 aaPredicted RBP8.22□□□□□ -1.09
SMC3-202ENST00000462899 TRPM5Q9NZQ8 1165 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 CFAP97Q9P2B7 532 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 TBC1D14Q9P2M4 693 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 BTBD3Q9Y2F9 522 aa8.22□□□□□ -1.09
SMC3-202ENST00000462899 TBC1D3BA6NDS4 549 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 KCNJ18B7U540 433 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 PRRT4C9JH25 899 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 CACNG3O60359 315 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 HUS1O60921 280 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 CER1O95813 267 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 IGLV3-19P01714 112 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 GNSP15586 552 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 BDNFP23560 247 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 LMO2P25791 158 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 ITPKBP27987 946 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 PCSK1P29120 753 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 EIF2S3P41091 472 aaKnown RBP8.21□□□□□ -1.1
SMC3-202ENST00000462899 WASP42768 502 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 CACNA2D1P54289 1103 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 PSMC1P62191 440 aaKnown RBP8.21□□□□□ -1.1
SMC3-202ENST00000462899 ENPP2Q13822 863 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 WDR45BQ5MNZ6 344 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 C10orf76Q5T2E6 689 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 SNX30Q5VWJ9 437 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 LARP1BQ659C4 914 aaKnown RBP8.21□□□□□ -1.1
SMC3-202ENST00000462899 SLFN12LQ6IEE8 588 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 DTHD1Q6ZMT9 781 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 C4orf50Q6ZRC1 276 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 DDX42Q86XP3 938 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMC3-202ENST00000462899 BBS7Q8IWZ6 715 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 ZCCHC9Q8N567 271 aaKnown RBP8.21□□□□□ -1.1
SMC3-202ENST00000462899 CADM4Q8NFZ8 388 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 PIP4K2CQ8TBX8 421 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 P2RY11Q96G91 374 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 PCED1BQ96HM7 432 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 C8orf48Q96LL4 319 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 CDC6Q99741 560 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 SYT15Q9BQS2 421 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 TRIM9Q9C026 710 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 GAREM1Q9H706 876 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 SPHK2Q9NRA0 654 aa8.21□□□□□ -1.1
SMC3-202ENST00000462899 ITGA11Q9UKX5 1188 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms