RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 RNF220Q5VTB9 566 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SNRNP48Q6IEG0 339 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 C1orf228Q6PIY5 440 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MTHFD1LQ6UB35 978 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ACAD11Q709F0 780 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KRT27Q7Z3Y8 459 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ZNF467Q7Z7K2 595 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ADGRG6Q86SQ4 1221 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 DHDDSQ86SQ9 333 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TTC7BQ86TV6 843 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 RASSF3Q86WH2 238 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 XYLT1Q86Y38 959 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 IGDCC3Q8IVU1 814 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 WDR75Q8IWA0 830 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 EXOC8Q8IYI6 725 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 RTKN2Q8IZC4 609 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NDUFAF2Q8N183 169 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NME8Q8N427 588 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TTC39CQ8N584 583 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SLC4A11Q8NBS3 891 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 RBM15BQ8NDT2 890 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 MCUQ8NE86 351 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 AGBL3Q8NEM8 1001 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CMASQ8NFW8 434 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 OR6Y1Q8NGX8 325 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 JOSD2Q8TAC2 188 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 GSDMBQ8TAX9 411 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PIP4K2CQ8TBX8 421 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ACMSDQ8TDX5 336 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PPP4R1Q8TF05 950 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 WDR60Q8WVS4 1066 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NRG4Q8WWG1 115 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TFAP2BQ92481 460 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CDKL2Q92772 493 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 GATA6Q92908 595 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ATG4CQ96DT6 458 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 RTP4Q96DX8 246 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 IFT43Q96FT9 208 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PRR11Q96HE9 360 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ZBTB45Q96K62 511 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 GMLQ99445 158 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TTC1Q99614 292 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 THTPAQ9BU02 230 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CCDC106Q9BWC9 280 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NIFKQ9BYG3 293 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SLC13A1Q9BZW2 595 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 HAPLN2Q9GZV7 340 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SDCBP2Q9H190 292 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ASCC2Q9H1I8 757 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 C1orf21Q9H246 121 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 C12orf65Q9H3J6 166 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 Q9H521 79 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 DHX33Q9H6R0 707 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ACAD9Q9H845 621 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CYP3A43Q9HB55 503 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 AS3MTQ9HBK9 375 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 POPDC2Q9HBU9 364 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 XAB2Q9HCS7 855 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ARHGEF4Q9NR80 690 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 KRT82Q9NSB4 513 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PCMTD2Q9NV79 361 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 THAP1Q9NVV9 213 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NDUFA13Q9P0J0 144 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SIRPGQ9P1W8 387 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 CNTN3Q9P232 1028 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SAE1Q9UBE0 346 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NXF1Q9UBU9 619 aaKnown RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PPP1R1BQ9UD71 204 aaPredicted RBP3.65□□□□□ -1.83
COL8A1-204ENST00000462604 ITGA11Q9UKX5 1188 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 USP18Q9UMW8 372 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SOX13Q9UN79 622 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PLA2G4CQ9UP65 541 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 SSX2IPQ9Y2D8 614 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 PLLPQ9Y342 182 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 TEX264Q9Y6I9 313 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 LTBP4Q8N2S1 1624 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 FOCADQ5VW36 1801 aa3.65□□□□□ -1.83
COL8A1-204ENST00000462604 NRXN2Q9P2S2 1712 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 ADAMTSL1Q8N6G6 1762 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 SMIM31A0A1B0GVY4 71 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 ANKRD33BA6NCL7 494 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 FAM159BA6NKW6 160 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 MEI4A8MW99 385 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 CXorf49A8MYA2 514 aaPredicted RBP3.64□□□□□ -1.83
COL8A1-204ENST00000462604 PRR5-ARHGAP8B1AHC4 643 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 ZNF487B1APH4 448 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 E5RJQ4 531 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 PDLIM1O00151 329 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 DPYSL4O14531 572 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 CREB3O43889 395 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 B4GALT4O60513 344 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 CCNT2O60583 730 aaKnown RBP3.64□□□□□ -1.83
COL8A1-204ENST00000462604 GLRA3O75311 464 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 SNNO75324 88 aaPredicted RBP3.64□□□□□ -1.83
COL8A1-204ENST00000462604 AVILO75366 819 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 H2AFYO75367 372 aaKnown RBP3.64□□□□□ -1.83
COL8A1-204ENST00000462604 RFPL1O75677 317 aa3.64□□□□□ -1.83
COL8A1-204ENST00000462604 ZNF189O75820 626 aaPredicted RBP3.64□□□□□ -1.83
COL8A1-204ENST00000462604 AP1G2O75843 785 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms