RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PIK3R2O00459 728 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 PER2O15055 1255 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 ATMINO43313 823 aaPredicted RBP11.16□□□□□ -0.62
RTF1-202ENST00000462276 BUB1O43683 1085 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 ENDOD1O94919 500 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 SPATA31D3P0C874 917 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 NCAM1P13591 858 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 EPCAMP16422 314 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 PSMA2P25787 234 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 DDX6P26196 483 aaKnown RBP eCLIP11.16□□□□□ -0.62
RTF1-202ENST00000462276 GBP1P32455 592 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 USP46P62068 366 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 NNTQ13423 1086 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 HADHQ16836 314 aaKnown RBP11.16□□□□□ -0.62
RTF1-202ENST00000462276 DCAF6Q58WW2 860 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 ZNF569Q5MCW4 686 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 ACBD5Q5T8D3 534 aaPredicted RBP11.16□□□□□ -0.62
RTF1-202ENST00000462276 SDHAF4Q5VUM1 108 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 MSANTD2Q6P1R3 559 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 SPATA31D4Q6ZUB0 917 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 SCD5Q86SK9 330 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 PHLDB2Q86SQ0 1253 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 RBM23Q86U06 439 aaKnown RBP11.16□□□□□ -0.62
RTF1-202ENST00000462276 DEFB106AQ8N104 65 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 NPY6RQ99463 290 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 ASAH2Q9NR71 780 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 GMIPQ9P107 970 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 TRIM10Q9UDY6 481 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
RTF1-202ENST00000462276 AMFRQ9UKV5 643 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 TFR2Q9UP52 801 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
RTF1-202ENST00000462276 ALG6Q9Y672 507 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 TSC2P49815 1807 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 A0A0U1RQJ8 604 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 CCDC66A2RUB6 948 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 RFXAPO00287 272 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 PALMO75781 387 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 MOCS3O95396 460 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 ABL1P00519 1130 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 F11P03951 625 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 FYNP06241 537 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 SLC2A3P11169 496 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 FLT3P36888 993 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 CDR1P51861 262 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 AIF1P55008 147 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 MESDQ14696 234 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 TAF5Q15542 800 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 CCDC14Q49A88 953 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 TCEAL5Q5H9L2 206 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 HECTD3Q5T447 861 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 SND1Q7KZF4 910 aaKnown RBP eCLIP11.15□□□□□ -0.62
RTF1-202ENST00000462276 RSRC2Q7L4I2 434 aaKnown RBP11.15□□□□□ -0.62
RTF1-202ENST00000462276 PEX26Q7Z412 305 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 POLNQ7Z5Q5 900 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 PSTKQ8IV42 348 aaKnown RBP11.15□□□□□ -0.62
RTF1-202ENST00000462276 JOSD2Q8TAC2 188 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 GPR152Q8TDT2 470 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 ATRIPQ8WXE1 791 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
RTF1-202ENST00000462276 SERPINB11Q96P15 392 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 TBCBQ99426 244 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 GAS2L1Q99501 681 aaPredicted RBP11.15□□□□□ -0.62
RTF1-202ENST00000462276 TTYH1Q9H313 450 aaPredicted RBP11.15□□□□□ -0.62
RTF1-202ENST00000462276 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 PRDM12Q9H4Q4 367 aa11.15□□□□□ -0.62
RTF1-202ENST00000462276 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
RTF1-202ENST00000462276 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.62
RTF1-202ENST00000462276 CCDC195A0A1B0GUA6 201 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 A0A1W2PQH9 124 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 CTAGE9A4FU28 777 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 SPOPO43791 374 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 TLR5O60602 858 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 GRAP2O75791 330 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 CSPG5O95196 566 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 KRT7P08729 469 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 RARGP13631 454 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 PRLRP16471 622 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 COMTP21964 271 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 RDXP35241 583 aaKnown RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 ATP5C1P36542 298 aaKnown RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 COG7P83436 770 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 ITIH3Q06033 890 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 HYAL1Q12794 435 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 IFRD2Q12894 506 aaPredicted RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 ADAM15Q13444 863 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 TUBB2AQ13885 445 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 GRIN2CQ14957 1233 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 COL19A1Q14993 1142 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 RPS6KA1Q15418 735 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 LLGL2Q6P1M3 1020 aa11.14□□□□□ -0.63
RTF1-202ENST00000462276 PDZD4Q76G19 769 aaPredicted RBP11.14□□□□□ -0.63
RTF1-202ENST00000462276 BNIPLQ7Z465 357 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms