RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-215	ENST00000461974	TTC30A	Q86WT1	665 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	KRTAP1-3	Q8IUG1	177 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-215	ENST00000461974	SPPL3	Q8TCT6	385 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	WDR60	Q8WVS4	1066 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	GCC1	Q96CN9	775 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	WDYHV1	Q96HA8	205 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	PDLIM2	Q96JY6	352 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	ZBTB45	Q96K62	511 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-215	ENST00000461974	HAPLN3	Q96S86	360 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	RTKN	Q9BST9	563 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	PAGR1	Q9BTK6	254 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	FSD1L	Q9BXM9	530 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	SAYSD1	Q9NPB0	183 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	GAR1	Q9NY12	217 aa	Known RBP	4.62	□□□□□ -1.67
FN1-215	ENST00000461974	LRFN1	Q9P244	771 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	GPR52	Q9Y2T5	361 aa		4.62	□□□□□ -1.67
FN1-215	ENST00000461974	NPIPB8	E9PQR5	432 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974		J3KTA2	159 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	IPO5	O00410	1097 aa	Known RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	TRIM38	O00635	465 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ZSCAN9	O15535	394 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	IRAK2	O43187	625 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	PMPCB	O75439	489 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ACTL6B	O94805	426 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	TNFRSF6B	O95407	300 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ERBB2	P04626	1255 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	CHRM2	P08172	466 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	SRGAP2B	P0DMP2	458 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	TMEM225B	P0DP42	221 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	MYCL	P12524	364 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	NTSR1	P30989	418 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	RENBP	P51606	427 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	CLCN2	P51788	898 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	SOX10	P56693	466 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	AP2B1	P63010	937 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	MRPS35	P82673	323 aa	Known RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	AASDH	Q4L235	1098 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A2P	Q658T7	463 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	KLHL17	Q6TDP4	642 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974		Q6ZPA2	131 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	PTCHD4	Q6ZW05	846 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974		Q6ZWC4	215 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	PARS2	Q7L3T8	475 aa	Known RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	RAB11FIP2	Q7L804	512 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ZNF804A	Q7Z570	1209 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	FSTL5	Q8N475	847 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	SLC44A3	Q8N4M1	653 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	METTL25	Q8N6Q8	603 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	SIRT6	Q8N6T7	355 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	NGDN	Q8NEJ9	315 aa	Known RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ACTRT2	Q8TDY3	377 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	THAP4	Q8WY91	577 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	R3HDM4	Q96D70	268 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	VPS50	Q96JG6	964 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	THAP7	Q9BT49	309 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	TTPAL	Q9BTX7	342 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	PABPC3	Q9H361	631 aa	Known RBP	4.61	□□□□□ -1.67
FN1-215	ENST00000461974	FSCN3	Q9NQT6	498 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	ARHGEF3	Q9NR81	526 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	DUSP22	Q9NRW4	184 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	FOXJ2	Q9P0K8	574 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	LRIT1	Q9P2V4	623 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	DKK3	Q9UBP4	350 aa		4.61	□□□□□ -1.67
FN1-215	ENST00000461974	PNMA6E	A0A0J9YXQ4	647 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A18P	A6NE21	464 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A16P	A6NEW6	464 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A9P	A6NNJ1	464 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A5P	A8MXJ8	464 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	SPRY2	O43597	315 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TAF5L	O75529	589 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TTLL1	O95922	423 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A15P	P0C7V4	464 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FAM90A14P	P0C7W9	464 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TACR2	P21452	398 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	ADRA1D	P25100	572 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	CTGF	P29279	349 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	PNLIPRP1	P54315	467 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	FOXI1	Q12951	378 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	ZNF169	Q14929	603 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-215	ENST00000461974	POSTN	Q15063	836 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TBC1D25	Q3MII6	688 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	AARS2	Q5JTZ9	985 aa	Known RBP	4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TTC22	Q5TAA0	569 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-215	ENST00000461974	IGFL4	Q6B9Z1	124 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-215	ENST00000461974	MSANTD2	Q6P1R3	559 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	NFRKB	Q6P4R8	1299 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	GGT6	Q6P531	493 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	CLEC9A	Q6UXN8	241 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	PEG10	Q86TG7	708 aa	Known RBP	4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TRABD2A	Q86V40	505 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	ANKRD18A	Q8IVF6	992 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	SFTPA1	Q8IWL2	248 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	PNPLA1	Q8N8W4	532 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TFAP2B	Q92481	460 aa		4.6	□□□□□ -1.67
FN1-215	ENST00000461974	TBC1D5	Q92609	795 aa		4.6	□□□□□ -1.67

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