RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 MCOLN2Q8IZK6 566 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ZDHHC14Q8IZN3 488 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ARHGAP18Q8N392 663 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ST13P5Q8NFI4 369 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 C11orf70Q9BRQ4 267 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ISCUQ9H1K1 167 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 NHEJ1Q9H9Q4 299 aaPredicted RBP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TRPV4Q9HBA0 871 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TRPC7Q9HCX4 862 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ADAM22Q9P0K1 906 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TCRBV5S1A1TA0A578 114 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ANHXE9PGG2 379 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TLR5O60602 858 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 RTN2O75298 545 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 PRAMEF12O95522 483 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 LTFP02788 710 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 FTLP02792 175 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 GSCP56915 257 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SNX16P57768 344 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 GFPT1Q06210 699 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ZNF268Q14587 947 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SLC18A3Q16572 532 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 PARM1Q6UWI2 310 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SLC26A9Q7LBE3 791 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TMEM139Q8IV31 216 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ARID3BQ8IVW6 561 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TDRD5Q8NAT2 981 aaKnown RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 EDEM1Q92611 657 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 FGF14Q92915 247 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SMARCD2Q92925 531 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 USP13Q92995 863 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ACSF2Q96CM8 615 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 RSPRY1Q96DX4 576 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 VCPIP1Q96JH7 1222 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ZFRQ96KR1 1074 aaKnown RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SLITRK6Q9H5Y7 841 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SYNCQ9H7C4 482 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ABCC13Q9NSE7 274 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 CCL26Q9Y258 94 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 NR2E1Q9Y466 385 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 MYO10Q9HD67 2058 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TRAV19A0A0A6YYK7 116 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ZNF263O14978 683 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 GLI1P08151 1106 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SCNN1AP37088 669 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 VIPR2P41587 438 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 YWHAZP63104 245 aaKnown RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SLC7A9P82251 487 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 HTR4Q13639 388 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 EFHC1Q5JVL4 640 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SYPL2Q5VXT5 272 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 BTBD8Q5XKL5 378 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TANGO2Q6ICL3 276 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TRNP1Q6NT89 227 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 KLHDC10Q6PID8 442 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 BEND5Q7L4P6 421 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 VPS36Q86VN1 386 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 MSANTD4Q8NCY6 345 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 RIN3Q8TB24 985 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ADAMTS19Q8TE59 1207 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 LRRC3BQ96PB8 259 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 SLC2A13Q96QE2 648 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 RPP25Q9BUL9 199 aaKnown RBP11.81□□□□□ -0.52
SSBP1-202ENST00000461433 PLA2G2FQ9BZM2 168 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 ASNSD1Q9NWL6 643 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 TMEM59LQ9UK28 342 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 NAALADL1Q9UQQ1 740 aa11.81□□□□□ -0.52
SSBP1-202ENST00000461433 KIF26AQ9ULI4 1882 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-202ENST00000461433 MDM4O15151 490 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 GRAP2O75791 330 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 CALB1P05937 261 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 CKMP06732 381 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 RALAP11233 206 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 RRM1P23921 792 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
SSBP1-202ENST00000461433 C10orf120Q5SQS8 335 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 MSANTD2Q6P1R3 559 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 ALKBH5Q6P6C2 394 aaKnown RBP11.8□□□□□ -0.52
SSBP1-202ENST00000461433 TOGARAM2Q6ZUX3 1019 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 FAM149B1Q96BN6 582 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 CCDC42Q96M95 316 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 KLF16Q9BXK1 252 aaPredicted RBP11.8□□□□□ -0.52
SSBP1-202ENST00000461433 POPDC2Q9HBU9 364 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 CD320Q9NPF0 282 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 TDP1Q9NUW8 608 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 LIMD1Q9UGP4 676 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 ARHGAP26Q9UNA1 814 aa11.8□□□□□ -0.52
SSBP1-202ENST00000461433 GOLGA8SH3BPF8 625 aa11.79□□□□□ -0.52
SSBP1-202ENST00000461433 HSF2BPO75031 334 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms