RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 NDUFAF4Q9P032 175 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 IFT80Q9P2H3 777 aaPredicted RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 PDP2Q9P2J9 529 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 VPS51Q9UID3 782 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 FEM1BQ9UK73 627 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 BAG5Q9UL15 447 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 RIMKLBQ9ULI2 386 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 DAPP1Q9UN19 280 aa3.61□□□□□ -1.83
VCL-203ENST00000461383 C19orf53Q9UNZ5 99 aaPredicted RBP3.61□□□□□ -1.83
VCL-203ENST00000461383 MARCH11A6NNE9 402 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 KIF28PB7ZC32 967 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 PRRT4C9JH25 899 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 ADM5C9JUS6 153 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 E7EVH7 732 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 J3KRW8 73 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 AGPSO00116 658 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 RPP40O75818 363 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 FAM155BO75949 473 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 WDR47O94967 919 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SPDEFO95238 335 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 LARGE1O95461 756 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 VNN1O95497 513 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 CER1O95813 267 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 PRKCBP05771 671 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 FESP07332 822 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 ITGAMP11215 1152 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 CKMT1AP12532 417 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 TNFRSF1AP19438 455 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SERPINA4P29622 427 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 KRT9P35527 623 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 BMPR1AP36894 532 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 ZEB1P37275 1124 aaPredicted RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 CLCN2P51788 898 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 RBM5P52756 815 aaKnown RBP eCLIP3.6□□□□□ -1.83
VCL-203ENST00000461383 ATXN1P54253 815 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 TIRAPP58753 221 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SUMO2P61956 95 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 SP2Q02086 613 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SF3A3Q12874 501 aaKnown RBP eCLIP3.6□□□□□ -1.83
VCL-203ENST00000461383 SEMA3BQ13214 749 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 TRPC3Q13507 836 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 TP53BP2Q13625 1128 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 CLCA4Q14CN2 919 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 MAPRE1Q15691 268 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 ST3GAL2Q16842 350 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 FAM110CQ1W6H9 321 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 NRN1LQ496H8 165 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 USP39Q53GS9 565 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 TMEM196Q5HYL7 178 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 INTS11Q5TA45 600 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 SYT13Q7L8C5 426 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 DTX2Q86UW9 622 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 LRRC71Q8N4P6 559 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 ESX1Q8N693 406 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SUPT20HQ8NEM7 779 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 IL17REQ8NFR9 667 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SUN3Q8TAQ9 357 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 LPIN2Q92539 896 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SDCCAG3Q96C92 435 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 MYEOVQ96EZ4 313 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 REXO5Q96IC2 774 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 FBXL20Q96IG2 436 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 C8orf49Q96NF6 230 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 WWC2-AS2Q96NR7 200 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 DDX23Q9BUQ8 820 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 KLC2Q9H0B6 622 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 VPS16Q9H269 839 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 CHODLQ9H9P2 273 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 NOD2Q9HC29 1040 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 CD248Q9HCU0 757 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 FSCN3Q9NQT6 498 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 SMC4Q9NTJ3 1288 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 LIN7CQ9NUP9 197 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 SLC13A4Q9UKG4 626 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 CNTN6Q9UQ52 1028 aa3.6□□□□□ -1.83
VCL-203ENST00000461383 RRP7AQ9Y3A4 280 aaKnown RBP3.6□□□□□ -1.83
VCL-203ENST00000461383 A0A1B0GVC2 190 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 CES2O00748 559 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 KIAA0355O15063 1070 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 YY2O15391 372 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 PEX1O43933 1283 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 NXPH3O95157 252 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ONECUT2O95948 504 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 TK1P04183 234 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 RHOP08100 348 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 CHRM2P08172 466 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 JUPP14923 745 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 TNFAIP3P21580 790 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 PBX1P40424 430 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 HNRNPMP52272 730 aaKnown RBP eCLIP3.59□□□□□ -1.83
VCL-203ENST00000461383 DGKQP52824 942 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 TPTEP56180 551 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 GEMIN4P57678 1058 aaKnown RBP3.59□□□□□ -1.83
VCL-203ENST00000461383 UBE3AQ05086 875 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 EFR3AQ14156 821 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ACOX1Q15067 660 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 ANKRD1Q15327 319 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 DLGAP5Q15398 846 aa3.59□□□□□ -1.83
VCL-203ENST00000461383 TREML2Q5T2D2 321 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms