RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TIGD7Q6NT04 549 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CCDC62Q6P9F0 684 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 FAM160B2Q86V87 743 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CCDC83Q8IWF9 413 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CTCFLQ8NI51 663 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CHURC1Q8WUH1 139 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 ASB15Q8WXK1 588 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 EDAQ92838 391 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 TTC17Q96AE7 1141 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 FOXRED1Q96CU9 486 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 IL17RAQ96F46 866 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 NEIL1Q96FI4 390 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 LRRC37BQ96QE4 947 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 TAAR9Q96RI9 348 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 TUBGCP5Q96RT8 1024 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC26A6Q9BXS9 759 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 PRO3102Q9H379 93 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 POFUT1Q9H488 388 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 RIOX1Q9H6W3 641 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 ZFR2Q9UPR6 939 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 FAM50BQ9Y247 325 aa5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 CTDP1Q9Y5B0 961 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-203ENST00000460928 PLXNA1Q9UIW2 1896 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 MYPNQ86TC9 1320 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 UBA6A0AVT1 1052 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ANO9A1A5B4 782 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 EPB41L2O43491 1005 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 PFKFB2O60825 505 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 APOL3O95236 402 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ICAM1P05362 532 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 LPLP06858 475 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 MMEP08473 750 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ZNF888P0CJ79 500 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 MTHFD2P13995 350 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 FDPSP14324 419 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 TNNT3P45378 269 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 EVCP57679 992 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 GUCY1B3Q02153 619 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 GALEQ14376 348 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ZNF267Q14586 743 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 RABEP1Q15276 862 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ZNF568Q3ZCX4 644 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 PITRM1Q5JRX3 1037 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 TTC38Q5R3I4 469 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ATAT1Q5SQI0 421 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 GPATCH4Q5T3I0 446 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 USP17L6PQ6QN14 398 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 SYNE3Q6ZMZ3 975 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 RINLQ6ZS11 566 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 HEATR3Q7Z4Q2 680 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 CCDC91Q7Z6B0 441 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 RTN4RL1Q86UN2 441 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 PPM1NQ8N819 430 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 GIMAP8Q8ND71 665 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 HIPK4Q8NE63 616 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 TRPV1Q8NER1 839 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 IL31RAQ8NI17 732 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 TRIB2Q92519 343 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 USP6NLQ92738 828 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 E2F7Q96AV8 911 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 RAX2Q96IS3 184 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 TAAR1Q96RJ0 339 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 TEX13BQ9BXU2 312 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 WNT8AQ9H1J5 351 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 SLITRK6Q9H5Y7 841 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 MSL2Q9HCI7 577 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ZCCHC17Q9NP64 241 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 A1CFQ9NQ94 594 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 MTMR10Q9NXD2 777 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 VPS54Q9P1Q0 977 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 KCNJ14Q9UNX9 436 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 ASB1Q9Y576 335 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 PAXBP1Q9Y5B6 917 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 PCDHA1Q9Y5I3 950 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 PKD1L2Q7Z442 2459 aa5.32□□□□□ -1.56
ATPAF1-203ENST00000460928 RPTORQ8N122 1335 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ZBTB5O15062 677 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 PLA2G6O60733 806 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 PRPF6O94906 941 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 CAPN2P17655 700 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 COMTP21964 271 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 CCND3P30281 292 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 KIF5BP33176 963 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ETV4P43268 484 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC5A3P53794 718 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 RAC3P60763 192 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ZMAT1Q5H9K5 638 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 MIIPQ5JXC2 388 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ZBTB41Q5SVQ8 909 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 CHST15Q7LFX5 561 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 TAX1BP1Q86VP1 789 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ANKRD35Q8N283 1001 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 TMTC2Q8N394 836 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 NSUN7Q8NE18 718 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 AUTS2Q8WXX7 1259 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 GTF3C6Q969F1 213 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 HPS3Q969F9 1004 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms