RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 CHURC1-FNTBB4DL54 471 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 RNF225M0QZC1 329 aaPredicted RBP24.16■■□□□ 1.46
PTPN4-208ENST00000460289 LILRB5O75023 590 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 RNF40O75150 1001 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 OPRD1P41143 372 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 GAD2Q05329 585 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 NAIF1Q69YI7 327 aaPredicted RBP24.16■■□□□ 1.46
PTPN4-208ENST00000460289 GBP6Q6ZN66 633 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 ENOSF1Q7L5Y1 443 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 KCTD13Q8WZ19 329 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 TFAP2BQ92481 460 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 UBE2TQ9NPD8 197 aaPredicted RBP24.16■■□□□ 1.46
PTPN4-208ENST00000460289 NUDT5Q9UKK9 219 aa24.16■■□□□ 1.46
PTPN4-208ENST00000460289 USP34Q70CQ2 3546 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 VPS13AQ96RL7 3174 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 GTPBP10A4D1E9 387 aaKnown RBP24.15■■□□□ 1.46
PTPN4-208ENST00000460289 TULP2O00295 520 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 ADH5P11766 374 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 EIF2DP41214 584 aaKnown RBP24.15■■□□□ 1.46
PTPN4-208ENST00000460289 MFAP3P55082 362 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 YWHAGP61981 247 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTPN4-208ENST00000460289 COG7P83436 770 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 PKDCCQ504Y2 493 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 LY6G5CQ5SRR4 150 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 BBS7Q8IWZ6 715 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 KREMEN1Q96MU8 473 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTPN4-208ENST00000460289 CNTN6Q9UQ52 1028 aa24.15■■□□□ 1.46
PTPN4-208ENST00000460289 HOXA6P31267 233 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 ZNF132P52740 706 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 EXOC3L4Q17RC7 722 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 GAB4Q2WGN9 574 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 BTBD8Q5XKL5 378 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 TRIM65Q6PJ69 517 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 SIX6OS1Q8N1H7 587 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 PNKPQ96T60 521 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 CRACR2AQ9BSW2 395 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 ULBP1Q9BZM6 244 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 SPHK2Q9NRA0 654 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 SLC8A2Q9UPR5 921 aa24.14■■□□□ 1.45
PTPN4-208ENST00000460289 MYO16Q9Y6X6 1858 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.13■■□□□ 1.45
PTPN4-208ENST00000460289 K7ESF4 209 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 MDM4O15151 490 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 GREM1O60565 184 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 KRT5P13647 590 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 MAN2A1Q16706 1144 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 PREPLQ4J6C6 727 aaPredicted RBP24.13■■□□□ 1.45
PTPN4-208ENST00000460289 RSRC2Q7L4I2 434 aaKnown RBP24.13■■□□□ 1.45
PTPN4-208ENST00000460289 MIB1Q86YT6 1006 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 SCML4Q8N228 414 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 GPT2Q8TD30 523 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 SLC35F5Q8WV83 523 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 WBP2Q969T9 261 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 CNGB3Q9NQW8 809 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 ZNF510Q9Y2H8 683 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 FANCMQ8IYD8 2048 aa24.13■■□□□ 1.45
PTPN4-208ENST00000460289 M0QYV0 167 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 PRKCSHP14314 528 aaPredicted RBP24.12■■□□□ 1.45
PTPN4-208ENST00000460289 SLC9A1P19634 815 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 BRD2P25440 801 aaKnown RBP24.12■■□□□ 1.45
PTPN4-208ENST00000460289 ADIGQ0VDE8 80 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 EFEMP1Q12805 493 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 SMYD5Q6GMV2 418 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 PKN3Q6P5Z2 889 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 LONP2Q86WA8 852 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 EZH1Q92800 747 aaPredicted RBP24.12■■□□□ 1.45
PTPN4-208ENST00000460289 HSFY1Q96LI6 401 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 ZSWIM1Q9BR11 485 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 OLA1Q9NTK5 396 aaKnown RBP24.12■■□□□ 1.45
PTPN4-208ENST00000460289 C2orf42Q9NWW7 574 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 APEX2Q9UBZ4 518 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 RASAL2Q9UJF2 1139 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 STRIP2Q9ULQ0 834 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 DMDP11532 3685 aa24.12■■□□□ 1.45
PTPN4-208ENST00000460289 A0A0A0MRY4 1105 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 HOXC11O43248 304 aaPredicted RBP24.11■■□□□ 1.45
PTPN4-208ENST00000460289 APODP05090 189 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 CNR2P34972 360 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 SLC6A11P48066 632 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 ANO4Q32M45 955 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 TMEM25Q86YD3 366 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 SUMF1Q8NBK3 374 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 RPLP0P6Q8NHW5 317 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 SECISBP2LQ93073 1101 aaKnown RBP24.11■■□□□ 1.45
PTPN4-208ENST00000460289 ACDQ96AP0 544 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 DCLK3Q9C098 648 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 EPC1Q9H2F5 836 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 MARCH2Q9P0N8 246 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 WDR35Q9P2L0 1181 aa24.11■■□□□ 1.45
PTPN4-208ENST00000460289 K7EQS6 105 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 MED7O43513 233 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 STC2O76061 302 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 KAT7O95251 611 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 LCP1P13796 627 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 PON1P27169 355 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 GRIA2P42262 883 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 FNTBP49356 437 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 PMF1Q6P1K2 205 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 NUDT18Q6ZVK8 323 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms