RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KRT1P04264 644 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PDGFRAP16234 1089 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PCK1P35558 622 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PTPN9P43378 593 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PEX5P50542 639 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 ZNF143P52747 638 aaPredicted RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 BRD3Q15059 726 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PAN2Q504Q3 1202 aaKnown RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 TCEAL5Q5H9L2 206 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PMF1Q6P1K2 205 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 CC2D1AQ6P1N0 951 aaPredicted RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 FAM171BQ6P995 826 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 OLFML1Q6UWY5 402 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 MAATS1Q7Z4T9 603 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 ZNF280BQ86YH2 543 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 SPATA2LQ8IUW3 424 aaPredicted RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 CCDC50Q8IVM0 306 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 RCOR2Q8IZ40 523 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 HASPINQ8TF76 798 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 ANKRD7Q92527 254 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 ALG3Q92685 438 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 KRT35Q92764 455 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 EDAQ92838 391 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 MYLPFQ96A32 169 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PCED1BQ96HM7 432 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 FUBP3Q96I24 572 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS50-207ENST00000458530 MS4A14Q96JA4 679 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PAAF1Q9BRP4 392 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 B3GNT5Q9BYG0 378 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 CRTAC1Q9NQ79 661 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 RRN3Q9NYV6 651 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 CACNG4Q9UBN1 327 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 STK39Q9UEW8 545 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 STAP1Q9ULZ2 295 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PRG3Q9Y2Y8 225 aaPredicted RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 NME7Q9Y5B8 376 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 MYO15AQ9UKN7 3530 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 ATG2AQ2TAZ0 1938 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 CCDC151A5D8V7 595 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 C2CD4BA6NLJ0 364 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 C5orf67F2Z3F1 127 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 I3L4J1 428 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 NRP1O14786 923 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 TRIM66O15016 1216 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 PRPSAP2O60256 369 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 DAB1O75553 588 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 RHOXF2BP0C7M4 288 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 LCP1P13796 627 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 TKTP29401 623 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 CHRNA3P32297 505 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 PTPN7P35236 360 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 ALDH7A1P49419 539 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 ADIGQ0VDE8 80 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 DHX34Q14147 1143 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 DCAF12L1Q5VU92 463 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 LLGL2Q6P1M3 1020 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 WDR93Q6P2C0 686 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS50-207ENST00000458530 CLEC20AQ6ZU45 233 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 ANKS3Q6ZW76 656 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 PIGZQ86VD9 579 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 SLC13A5Q86YT5 568 aaPredicted RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 SCML4Q8N228 414 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 NOA1Q8NC60 698 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 LRRN4CLQ8ND94 238 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 GRK7Q8WTQ7 553 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 C2orf15Q8WU43 125 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 IRGQQ8WZA9 623 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 TBCBQ99426 244 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 PRRX2Q99811 253 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 RHOXF2Q9BQY4 288 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 TRIM7Q9C029 511 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 RAB17Q9H0T7 212 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 NSUN3Q9H649 340 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 RBM12Q9NTZ6 932 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 MUTYHQ9UIF7 546 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 TMEM59LQ9UK28 342 aa9.35□□□□□ -0.91
VPS50-207ENST00000458530 TIMM13Q9Y5L4 95 aaPredicted RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 ZNF638Q14966 1978 aaKnown RBP9.35□□□□□ -0.91
VPS50-207ENST00000458530 KMT2EQ8IZD2 1858 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 MYBPHLA2RUH7 354 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 CLDN5O00501 218 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 PAPSS1O43252 624 aaPredicted RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 MBTPS2O43462 519 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 HCRTO43612 131 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 PHF2O75151 1096 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 ATP2C2O75185 946 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 LRCH4O75427 683 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 DGKIO75912 1065 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 TJP3O95049 919 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 GJB6O95452 261 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 LAG3P18627 525 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FGFR3P22607 806 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 GBP1P32455 592 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms